Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00033 ATGTCAGAGGCGGAGGAATTGCCCAGGACTATCGTGCGCCGCGTGGTGAAGGATAAGCTCTCCCGTTTCTCCGACGACGGAGACATTTCCGTCCACAAAGACGCTCTTCTCGCATTCTCCGAAAGCGCTAGGATCTTCATACACTACCTTTCTGCAACGGCTAATGACATATGTAAGGAATCAAAGAGGCAGATTATCAATGCTGAAGATGTTTTCAAAGCTCTTGAAGAAACTGAGTTCTCTGAGTTTGTTCGTCCTCTAAAAGCTTCTCTTGAAGAGTTCAGGAAGAAGAATGCTGGGAAGAAAGCGGCAGTGTCAAAGGGAAAGGGAAATGAGACGAAAAAGAAAAGAAAGTTGGAAGATGAATCATCTGATAAAGGAGAGGGTGGTGACAGTCAATGA 402 0.4552 MSEAEELPRTIVRRVVKDKLSRFSDDGDISVHKDALLAFSESARIFIHYLSATANDICKESKRQIINAEDVFKALEETEFSEFVRPLKASLEEFRKKNAGKKAAVSKGKGNETKKKRKLEDESSDKGEGGDSQ 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00033 133 FunFam DNA polymerase epsilon subunit 3 1 133 - -
Gabi3372g00033 133 MobiDBLite consensus disorder prediction 107 133 - -
Gabi3372g00033 133 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Gabi3372g00033 133 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 128 - -
Gabi3372g00033 133 Gene3D Histone, subunit A 1 133 IPR009072 GO:0046982
Gabi3372g00033 133 Coils Coil 58 78 - -
Gabi3372g00033 133 MobiDBLite consensus disorder prediction 98 133 - -
Gabi3372g00033 133 SUPERFAMILY Histone-fold 7 122 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00033 7 117 CCAAT-HAP3 Transcription Factor Family AT3G53340 31.532 2.82e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Gabi3372g00033 CBFD_NFYB_HMF 1e-08 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3372g00033 K02326 - gmx:100306382 204.142