Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00031 ATGTACCATCATCATCAACACCAAGGAAAGAACATTCATTCTTCTTCAAGAATGTCAATCCCTTCTGAGAGGCATATGTTCCTTCAAACCGGAAGTGGGTCTGGTGATTCTGGACTTGTTCTGTCAACTGATGCTAAGCCTAGATTGAAATGGACACCAGATCTTCATGCCAGGTTTATTGAAGCAGTGCATCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACAGTGATGAAACTCATGGGAATTCCAGGGCTTACCTTATATCATCTAAAAAGTCATCTTCAGAAGTACAGATTGAGCAAGAATATGCATGGACAAAGTAACAATGTGACACACAAAATCAGTCCAGCAACAGGAGAAAGACTCTCTGAAAATAATGGAACTCATATGAACAATTTAAACCTTGGCTCTCAGTCTAACAAAGATTTACACATAAATGAGGCACTGCAGATGCAGATAGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTGCAAAGACTCTTACAGCTCCGGATAGAGGCCCAAGGAAAATACCTGCAAGCTGTGTTAGAGAAAGCTCAGGAAACACTTGGTAGACAGAACTTGGGAATAGTAGGACTTGAAACTGCTAAAGTTCAACTTTCAGAGCTTGTGTCCAAAGTATCCTCTCAGTGCCTGAATTCAGCATTTTCAGAACTGAAGGAATTACAAGGGTTTAGTCCACAACAAACACAAAACAACCAGCCTAATGACTACTCCATGGACAATTGCCTCACATCCCGTGAGGGATCAGAAAATGAGCAAGAAATGCAAAATGGGGGGATGAGCTTAAGACCCTTCAATGGTCATACATTCATGGAAACAAAGGAAGTCATAGAGGCTCATAATCCCAACCTACGGAACTCTGAGATCAAATGGTGTGATCAAGGGAAAAAGAACACTTTTCTTACCCCATTAGGCAAGAATTCAGAAAGAAGAAGTTATGTTGTAGAAAGAAGTCCCAGCAACTTATCTATGAGCATTGGGGTTGAAGGAGAAACAGATGGTGAATTCCAACAGCTAAGCACCATTAGGAAAGAATCAATGAAACCAGGGACTGATAAAGTTTCTCAAGATTATAGATTGCCTTCTTACTTTTCAACAAGACTGGACCTATCCACTGAAGATAATGACGCTGAAACGAGTTGTAAACAACTTGACTTGAATAGATTCAGTTGGAACTGA 1209 0.4078 MYHHHQHQGKNIHSSSRMSIPSERHMFLQTGSGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNMHGQSNNVTHKISPATGERLSENNGTHMNNLNLGSQSNKDLHINEALQMQIEVQRRLNEQLEVQRLLQLRIEAQGKYLQAVLEKAQETLGRQNLGIVGLETAKVQLSELVSKVSSQCLNSAFSELKELQGFSPQQTQNNQPNDYSMDNCLTSREGSENEQEMQNGGMSLRPFNGHTFMETKEVIEAHNPNLRNSEIKWCDQGKKNTFLTPLGKNSERRSYVVERSPSNLSMSIGVEGETDGEFQQLSTIRKESMKPGTDKVSQDYRLPSYFSTRLDLSTEDNDAETSCKQLDLNRFSWN 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00031 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 268 IPR044848 GO:0003700
Gabi3372g00031 402 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Gabi3372g00031 402 Coils Coil 147 167 - -
Gabi3372g00031 402 Pfam MYB-CC type transfactor, LHEQLE motif 145 191 IPR025756 -
Gabi3372g00031 402 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Gabi3372g00031 402 FunFam Myb family transcription factor 45 103 - -
Gabi3372g00031 402 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Gabi3372g00031 402 Gene3D - 45 103 - -
Gabi3372g00031 402 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3372g00031 Gabi-Chr3372 290031 292619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00031 78 402 G2-like Transcription Factor Family AT3G04030 50.149 4.42e-94 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi3372g00031 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3372g00031 - - gmx:100810396 600.897