Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00024 ATGTTCCCTTCATGGCCAATGAGATATCAGCAAACTCCAAGAGGAGGTTCTAATTCAGGAGGGGAAAGCTCTGATTCAGGATCAGGAATGAACACTCTATCAAGCAAAATGGAGCTCCAATTTGAAACAGAATCTCCCATGAATAAAAAGGCATCTTCTTCAGATAATCATGCTTTTGATCAGCAGCAACAACTGCTTCTTCAACAGCAACAGCAACACCAGTTTCATCAGGAGACTATAATTGATGCCTCAAGAACAGGACTATCACAGAATCAATCAGCTGCCAAATCACCACAGGAAAAGAGGAAGGGAACTGGTTCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTCACCCACCTAGAACAAGATCTTCAAAGAGCACGCTCTCAGGGACTGTTGGGTTGTGGTGGTGCTGGTGGAAATATGAGCTCAGGAGCTGCAATGTTTGACATGGAGTATGCAAGGTGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACGGGGCTGCAGGCGCCGCTATCGGACAGTGAACTGAGAGTGATGGTGGACGGATATCTGACTCATTATGATGAGGTTTTCCGGCTGAAGGAGGTGGCTGCTAGATCAGATGTGTTTCACCTTATTAATGGCATGTGGACTTCACCAGCTGAGCGATGCTTCCTATGGATTGCTGGTTTTAGACCCTCAGAGCTCATCACAATGTTGGTACAACAATTGGAGCCTTTAGCGGAGCAGCAAATAATGGGTATATATGGGCTCAGGCACTCATCACAGCAAGCAGAAGAGGCTCTATCTCAAGGCCTTGAACAGCTCCACCACTCTCTGGTTGAAACCATCGCCGGCGGTCCCGTCGTTGACGGTGTCCAACAGATGGTCCTCGCCATGAGCAAGCTTGCCAACCTTGAAGGATTCGTCCGTCAGGCTGATAATTTGAGGCAGCAAACTCTTCACCAATTATGTCGATTACTTACAATTCGTCAAGCAGCACGATGTTTCCTTGTGATTGGAGAGTATCATGGCCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCAAGACCAAGAGAGACCTTCATCAGTGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCATCCTTCACAGAATCATTTCTCAAGTTTCTGA 1260 0.469 MFPSWPMRYQQTPRGGSNSGGESSDSGSGMNTLSSKMELQFETESPMNKKASSSDNHAFDQQQQLLLQQQQQHQFHQETIIDASRTGLSQNQSAAKSPQEKRKGTGSGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGLLGCGGAGGNMSSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDSELRVMVDGYLTHYDEVFRLKEVAARSDVFHLINGMWTSPAERCFLWIAGFRPSELITMLVQQLEPLAEQQIMGIYGLRHSSQQAEEALSQGLEQLHHSLVETIAGGPVVDGVQQMVLAMSKLANLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVIGEYHGRLRALSSLWASRPRETFISDDNSCQTTTELQMVHPSQNHFSSF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00024 419 Pfam bZIP transcription factor 117 159 IPR004827 GO:0003700|GO:0006355
Gabi3372g00024 419 Pfam Seed dormancy control 197 272 IPR025422 GO:0006351|GO:0043565
Gabi3372g00024 419 PANTHER TRANSCRIPTION FACTOR TGA9 41 391 - -
Gabi3372g00024 419 Coils Coil 144 164 - -
Gabi3372g00024 419 FunFam BZIP family transcription factor 117 166 - -
Gabi3372g00024 419 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 121 136 IPR004827 GO:0003700|GO:0006355
Gabi3372g00024 419 SUPERFAMILY Leucine zipper domain 118 160 IPR046347 GO:0003700|GO:0006355
Gabi3372g00024 419 MobiDBLite consensus disorder prediction 86 119 - -
Gabi3372g00024 419 ProSiteProfiles DOG1 domain profile. 180 388 IPR025422 GO:0006351|GO:0043565
Gabi3372g00024 419 MobiDBLite consensus disorder prediction 86 114 - -
Gabi3372g00024 419 MobiDBLite consensus disorder prediction 10 62 - -
Gabi3372g00024 419 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 116 160 IPR004827 GO:0003700|GO:0006355
Gabi3372g00024 419 SMART brlzneu 114 189 IPR004827 GO:0003700|GO:0006355
Gabi3372g00024 419 Gene3D - 117 166 - -
Gabi3372g00024 419 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3372g00024 Gabi-Chr3372 232895 240459 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00024 74 419 bZIP Transcription Factor Family AT1G08320 69.602 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3372g00024 DOG1 2.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3372g00024 K14431 - gmx:100101904 628.632