Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00023 ATGGCGAGCCAAAGAATAGGAGAAACGGATTTGTCTGAGTCACGGCCTTCAAGTCATCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCCCACCATCAAGCTTAATGAACCAAGGATCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTACAAGGAATAAAGATAAGAAATGATGAAGCCAAAGCATCTTTGTTTGCAGGCAAGCCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATATCAGCAAACTCCAAGAGTATTAGTCTCTCTCACTTTTCCATCTTTGACCAATCCATATGGAGGTTCTAATTCAGGAGGGGAAAGCTCTGATTCAGGATCAGGAATGAACACTCTATCAAGCAAAATGGAGCTCCAATTTGAAACAGAATCTCCCATGAATAAAAAGGCATCTTCTTCAGATAATCATCAACACCAGTTTCATCAGGAGACTATAATTGATGCCTCAAGAACAGGACTATCACAGAATCAATCAGCTGCCAAATCACCACAGGAAAAGGGAACTGGTTCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTCACCCACCTAGAACAAGATCTTCAAAGAGCACGCTCTCAGGGACTGTTGGGTTGTGGTGGTGCTGGTGGAAATATGAGCTCAGGAGCTGCAATGTTTGACATGGAGTATGCAAGGTGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACGGGGCTGCAGGCGCCGCTATCGGACAGTGAACTGAGAGTGATGGTGGACGGATATCTGACTCATTATGATGAGGTTTTCCGGCTGAAGGAGGTGGCTGCTAGATCAGATGTGTTTCACCTTATTAATGGCATGTGGACTTCACCAGCTGAGCGATGCTTCCTATGGATTGCTGGTTTTAGACCCTCAGAGCTCATCACAATGTTGGTACAACAATTGGAGCCTTTAGCGGAGCAGCAAATAATGGGTATATATGGGCTCAGGCACTCATCACAGCAAGCAGAAGAGGCTCTATCTCAAGGCCTTGAACAGCTCCACCACTCTCTGGTTGAAACCATCGCCGGCGGTCCCGTCGTTGACGGTGTCCAACAGATGGTCCTCGCCATGAGCAAGCTTGCCAACCTTGAAGGATTCGTCCGTCAGGCTGATAATTTGAGGCAGCAAACTCTTCACCAATTATGTCGATTACTTACAATTCGTCAAGCAGCACGATGTTTCCTTGTGATTGGAGAGTATCATGGCCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCAAGACCAAGAGAGACCTTCATCAGTGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCATCCTTCACAGAATCATTTCTCAAGTTTCTGA 1488 0.4603 MASQRIGETDLSESRPSSHHVPYGVLHGINTPPSSLMNQGSAFDFGELEEAIVLQGIKIRNDEAKASLFAGKPAATLEMFPSWPMRYQQTPRVLVSLTFPSLTNPYGGSNSGGESSDSGSGMNTLSSKMELQFETESPMNKKASSSDNHQHQFHQETIIDASRTGLSQNQSAAKSPQEKGTGSGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGLLGCGGAGGNMSSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDSELRVMVDGYLTHYDEVFRLKEVAARSDVFHLINGMWTSPAERCFLWIAGFRPSELITMLVQQLEPLAEQQIMGIYGLRHSSQQAEEALSQGLEQLHHSLVETIAGGPVVDGVQQMVLAMSKLANLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVIGEYHGRLRALSSLWASRPRETFISDDNSCQTTTELQMVHPSQNHFSSF 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00023 495 FunFam BZIP family transcription factor 193 242 - -
Gabi3372g00023 495 Pfam Seed dormancy control 273 348 IPR025422 GO:0006351|GO:0043565
Gabi3372g00023 495 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3372g00023 495 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 197 212 IPR004827 GO:0003700|GO:0006355
Gabi3372g00023 495 PANTHER TRANSCRIPTION FACTOR TGA9 128 467 - -
Gabi3372g00023 495 Gene3D - 193 242 - -
Gabi3372g00023 495 SUPERFAMILY Leucine zipper domain 194 236 IPR046347 GO:0003700|GO:0006355
Gabi3372g00023 495 MobiDBLite consensus disorder prediction 103 124 - -
Gabi3372g00023 495 Pfam bZIP transcription factor 193 235 IPR004827 GO:0003700|GO:0006355
Gabi3372g00023 495 Coils Coil 220 240 - -
Gabi3372g00023 495 ProSiteProfiles DOG1 domain profile. 256 464 IPR025422 GO:0006351|GO:0043565
Gabi3372g00023 495 SMART brlzneu 190 265 IPR004827 GO:0003700|GO:0006355
Gabi3372g00023 495 MobiDBLite consensus disorder prediction 165 190 - -
Gabi3372g00023 495 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 192 236 IPR004827 GO:0003700|GO:0006355
Gabi3372g00023 495 MobiDBLite consensus disorder prediction 165 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3372g00023 Gabi-Chr3372 232895 241051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00023 152 495 bZIP Transcription Factor Family AT1G08320 69.253 4.28e-178 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3372g00023 DOG1 2.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3372g00023 K14431 - gmx:100101904 742.651