Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00022 ATGGCGAGCCAAAGAATAGGAGAAACGGATTTGTCTGAGTCACGGCCTTCAAGTCATCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCCCACCATCAAGCTTAATGAACCAAGGATCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTACAAGGAATAAAGATAAGAAATGATGAAGCCAAAGCATCTTTGTTTGCAGGCAAGCCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATATCAGCAAACTCCAAGAGTATTAGGAGGTTCTAATTCAGGAGGGGAAAGCTCTGATTCAGGATCAGGAATGAACACTCTATCAAGCAAAATGGAGCTCCAATTTGAAACAGAATCTCCCATGAATAAAAAGCAACAACTGCTTCTTCAACAGCAACAGCAACACCAGTTTCATCAGGAGACTATAATTGATGCCTCAAGAACAGGACTATCACAGAATCAATCAGCTGCCAAATCACCACAGGAAAAGAGGAAGGGAACTGGTTCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTCACCCACCTAGAACAAGATCTTCAAAGAGCACGCTCTCAGGGACTGTTGGGTTGTGGTGGTGCTGGTGGAAATATGAGCTCAGGAGCTGCAATGTTTGACATGGAGTATGCAAGGTGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACGGGGCTGCAGGCGCCGCTATCGGACAGTGAACTGAGAGTGATGGTGGACGGATATCTGACTCATTATGATGAGGTTTTCCGGCTGAAGGAGGTGGCTGCTAGATCAGATGTGTTTCACCTTATTAATGGCATGTGGACTTCACCAGCTGAGCGATGCTTCCTATGGATTGCTGGTTTTAGACCCTCAGAGCTCATCACAATGTTGGTACAACAATTGGAGCCTTTAGCGGAGCAGCAAATAATGGGTATATATGGGCTCAGGCACTCATCACAGCAAGCAGAAGAGGCTCTATCTCAAGGCCTTGAACAGCTCCACCACTCTCTGGTTGAAACCATCGCCGGCGGTCCCGTCGTTGACGGTGTCCAACAGATGGTCCTCGCCATGAGCAAGCTTGCCAACCTTGAAGGATTCGTCCGTCAGGCTGATAATTTGAGGCAGCAAACTCTTCACCAATTATGTCGATTACTTACAATTCGTCAAGCAGCACGATGTTTCCTTGTGATTGGAGAGTATCATGGCCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCAAGACCAAGAGAGACCTTCATCAGTGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCATCCTTCACAGAATCATTTCTCAAGTTTCTGA 1464 0.4638 MASQRIGETDLSESRPSSHHVPYGVLHGINTPPSSLMNQGSAFDFGELEEAIVLQGIKIRNDEAKASLFAGKPAATLEMFPSWPMRYQQTPRVLGGSNSGGESSDSGSGMNTLSSKMELQFETESPMNKKQQLLLQQQQQHQFHQETIIDASRTGLSQNQSAAKSPQEKRKGTGSGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGLLGCGGAGGNMSSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDSELRVMVDGYLTHYDEVFRLKEVAARSDVFHLINGMWTSPAERCFLWIAGFRPSELITMLVQQLEPLAEQQIMGIYGLRHSSQQAEEALSQGLEQLHHSLVETIAGGPVVDGVQQMVLAMSKLANLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVIGEYHGRLRALSSLWASRPRETFISDDNSCQTTTELQMVHPSQNHFSSF 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00022 487 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3372g00022 487 SUPERFAMILY Leucine zipper domain 186 228 IPR046347 GO:0003700|GO:0006355
Gabi3372g00022 487 Gene3D - 185 234 - -
Gabi3372g00022 487 ProSiteProfiles DOG1 domain profile. 248 456 IPR025422 GO:0006351|GO:0043565
Gabi3372g00022 487 SMART brlzneu 182 257 IPR004827 GO:0003700|GO:0006355
Gabi3372g00022 487 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Gabi3372g00022 487 MobiDBLite consensus disorder prediction 89 112 - -
Gabi3372g00022 487 Pfam Seed dormancy control 265 340 IPR025422 GO:0006351|GO:0043565
Gabi3372g00022 487 Pfam bZIP transcription factor 185 227 IPR004827 GO:0003700|GO:0006355
Gabi3372g00022 487 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Gabi3372g00022 487 MobiDBLite consensus disorder prediction 91 112 - -
Gabi3372g00022 487 PANTHER TRANSCRIPTION FACTOR TGA9 120 459 - -
Gabi3372g00022 487 FunFam BZIP family transcription factor 185 234 - -
Gabi3372g00022 487 Coils Coil 212 232 - -
Gabi3372g00022 487 MobiDBLite consensus disorder prediction 154 182 - -
Gabi3372g00022 487 MobiDBLite consensus disorder prediction 154 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3372g00022 Gabi-Chr3372 232895 241051 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00022 127 487 bZIP Transcription Factor Family AT1G08320 67.760 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3372g00022 DOG1 2.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3372g00022 K14431 - gmx:100101904 737.643