Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00021 ATGGCGAGCCAAAGAATAGGAGAAACGGATTTGTCTGAGTCACGGCCTTCAAGTCATCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCCCACCATCAAGCTTAATGAACCAAGGATCTGCTTTTGATTTTGGAGAGCTGGAAGAGGCAATTGTTCTACAAGGAATAAAGATAAGAAATGATGAAGCCAAAGCATCTTTGTTTGCAGGCAAGCCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATGAGATATCAGCAAACTCCAAGAGGAGGTTCTAATTCAGGAGGGGAAAGCTCTGATTCAGGATCAGGAATGAACACTCTATCAAGCAAAATGGAGCTCCAATTTGAAACAGAATCTCCCATGAATAAAAAGGCATCTTCTTCAGATAATCATGCTTTTGATCAGCAGCAACAACTGCTTCTTCAACAGCAACAGCAACACCAGTTTCATCAGGAGACTATAATTGATGCCTCAAGAACAGGACTATCACAGAATCAATCAGCTGCCAAATCACCACAGGAAAAGAGGAAGGGAACTGGTTCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAATCAAGTAGATTAAAGCTCACCCACCTAGAACAAGATCTTCAAAGAGCACGCTCTCAGGGACTGTTGGGTTGTGGTGGTGCTGGTGGAAATATGAGCTCAGGAGCTGCAATGTTTGACATGGAGTATGCAAGGTGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACGGGGCTGCAGGCGCCGCTATCGGACAGTGAACTGAGAGTGATGGTGGACGGATATCTGACTCATTATGATGAGGTTTTCCGGCTGAAGGAGGTGGCTGCTAGATCAGATGTGTTTCACCTTATTAATGGCATGTGGACTTCACCAGCTGAGCGATGCTTCCTATGGATTGCTGGTTTTAGACCCTCAGAGCTCATCACAATGTTGGTACAACAATTGGAGCCTTTAGCGGAGCAGCAAATAATGGGTATATATGGGCTCAGGCACTCATCACAGCAAGCAGAAGAGGCTCTATCTCAAGGCCTTGAACAGCTCCACCACTCTCTGGTTGAAACCATCGCCGGCGGTCCCGTCGTTGACGGTGTCCAACAGATGGTCCTCGCCATGAGCAAGCTTGCCAACCTTGAAGGATTCGTCCGTCAGGCTGATAATTTGAGGCAGCAAACTCTTCACCAATTATGTCGATTACTTACAATTCGTCAAGCAGCACGATGTTTCCTTGTGATTGGAGAGTATCATGGCCGTCTTCGAGCCCTTAGTTCTCTTTGGGCATCAAGACCAAGAGAGACCTTCATCAGTGATGATAACTCATGCCAAACAACCACGGAATTGCAAATGGTTCATCCTTCACAGAATCATTTCTCAAGTTTCTGA 1494 0.4632 MASQRIGETDLSESRPSSHHVPYGVLHGINTPPSSLMNQGSAFDFGELEEAIVLQGIKIRNDEAKASLFAGKPAATLEMFPSWPMRYQQTPRGGSNSGGESSDSGSGMNTLSSKMELQFETESPMNKKASSSDNHAFDQQQQLLLQQQQQHQFHQETIIDASRTGLSQNQSAAKSPQEKRKGTGSGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGLLGCGGAGGNMSSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDSELRVMVDGYLTHYDEVFRLKEVAARSDVFHLINGMWTSPAERCFLWIAGFRPSELITMLVQQLEPLAEQQIMGIYGLRHSSQQAEEALSQGLEQLHHSLVETIAGGPVVDGVQQMVLAMSKLANLEGFVRQADNLRQQTLHQLCRLLTIRQAARCFLVIGEYHGRLRALSSLWASRPRETFISDDNSCQTTTELQMVHPSQNHFSSF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00021 497 MobiDBLite consensus disorder prediction 1 20 - -
Gabi3372g00021 497 Pfam bZIP transcription factor 195 237 IPR004827 GO:0003700|GO:0006355
Gabi3372g00021 497 Coils Coil 222 242 - -
Gabi3372g00021 497 Gene3D - 195 244 - -
Gabi3372g00021 497 MobiDBLite consensus disorder prediction 164 197 - -
Gabi3372g00021 497 MobiDBLite consensus disorder prediction 164 192 - -
Gabi3372g00021 497 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 199 214 IPR004827 GO:0003700|GO:0006355
Gabi3372g00021 497 ProSiteProfiles DOG1 domain profile. 258 466 IPR025422 GO:0006351|GO:0043565
Gabi3372g00021 497 SUPERFAMILY Leucine zipper domain 196 238 IPR046347 GO:0003700|GO:0006355
Gabi3372g00021 497 SMART brlzneu 192 267 IPR004827 GO:0003700|GO:0006355
Gabi3372g00021 497 MobiDBLite consensus disorder prediction 85 110 - -
Gabi3372g00021 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 194 238 IPR004827 GO:0003700|GO:0006355
Gabi3372g00021 497 MobiDBLite consensus disorder prediction 88 110 - -
Gabi3372g00021 497 Pfam Seed dormancy control 275 350 IPR025422 GO:0006351|GO:0043565
Gabi3372g00021 497 FunFam BZIP family transcription factor 195 244 - -
Gabi3372g00021 497 PANTHER TRANSCRIPTION FACTOR TGA9 116 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3372g00021 Gabi-Chr3372 232895 241051 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00021 152 497 bZIP Transcription Factor Family AT1G08320 69.602 4.53e-180 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3372g00021 DOG1 2.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3372g00021 K14431 - gmx:100101904 756.133