Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3372g00010 ATGGCGGAAGAACATCGATGCCAAGCTCCACGACTCTGCACCAACAATTGTGGCTTCTTCGGAAGTCCGGCGATGCAGGATCTTTGCTCCAAATGCTATCGAGATTTGCAGATCAAGGAACAGCAATCTTCCTCCGCTAAATTGGTTCTCAACCAATCCCTAGCACCTTCGCCGCCGTCTCAGGCGGTTCTGTTGCCGTCTTCTTCCTCTTCGTCGCCGCAGGAACCGGTCGTTGCTCCTTCTTTCGTTGAGGAGAAGAGCGGATCGGCGGCGCAGCCGAATCGGTGCGTGACTTGCAGGCGGCGCGTGGGATTGACGGGCTTCAAGTGCCGGTGCGGGTTGACGCTGTGCGGGTCGCACCGGTACCCGGAGCAACACGGGTGCGAGTTCGACTTCAAGGAGATGGGAAGGGAGCAGATCGCGAAGGCAAACCCAGTGGTGAAGGCCGAGAAACTTCACAAGATATGA 468 0.5726 MAEEHRCQAPRLCTNNCGFFGSPAMQDLCSKCYRDLQIKEQQSSSAKLVLNQSLAPSPPSQAVLLPSSSSSSPQEPVVAPSFVEEKSGSAAQPNRCVTCRRRVGLTGFKCRCGLTLCGSHRYPEQHGCEFDFKEMGREQIAKANPVVKAEKLHKI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3372g00010 155 Gene3D - 72 141 IPR035896 -
Gabi3372g00010 155 Gene3D - 1 71 - -
Gabi3372g00010 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 9 155 - -
Gabi3372g00010 155 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Gabi3372g00010 155 SMART AN1_Zf_4 96 133 IPR000058 GO:0008270
Gabi3372g00010 155 Pfam AN1-like Zinc finger 98 132 IPR000058 GO:0008270
Gabi3372g00010 155 ProSiteProfiles Zinc finger AN1-type profile. 90 136 IPR000058 GO:0008270
Gabi3372g00010 155 MobiDBLite consensus disorder prediction 56 85 - -
Gabi3372g00010 155 FunFam Zinc finger AN1-type containing 6 68 151 - -
Gabi3372g00010 155 SUPERFAMILY AN1-like Zinc finger 88 150 IPR035896 -
Gabi3372g00010 155 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Gabi3372g00010 155 MobiDBLite consensus disorder prediction 56 77 - -
Gabi3372g00010 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 57 - -
Gabi3372g00010 155 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3372g00010 Gabi-Chr3372 84770 85690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3372g00010 1 155 C2H2 Transcription Factor Family AT3G52800 47.953 5.99e-47 148