Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3366g00003 ATGTCGCTACTAAGTATGTTTTTACATAATCTTACCAAATCCTTTTCTCTTCTTTGGCTTCAATTACTGCTGATCTTGCTGAGCAGTGCTTCAGTTAATGGAGTTGAGCAAAAGAACTTTTACATTGTTTTCATGGGAGCTCATCCTGTGACGAGAGACATTGCATCTGAGACCCATTTGAATGTTCTATCTGCTGTGAAGGGAAGCTACCTTGATGCCAAAGAATCCATGGTATATAGCTACTCAAAGAGCTTCAATGCATTTGCAGCAAAACTGTCTGAGGATGAAGCCAACAAGTTATCTGCCATGGATGAAGTGCTGTTGGTATCTCAAAATCAGTACCGCAAGCTACACACAACAAGATCATGGAACTTCATTGGATTACCTCTGACTGCTAAGAGAAGATTGAAATTAGAAAGTGACATAGTTGTTGCTCTTTTGGATTCAGGGATCACGCCTGAGTCTAAAAGCTTCAAGGATGATGGGTTTGGTCCACCACCAGCAAAATGGAAAGGAGATTGTGGCAACTATGCTAATTTTTCAGGATGCAATAACAAGATCATAGGAGCCAAATACTTCAAGGGTGATGGAATCCCAGATCCAACTGACATATTATCTCCCATAGATATTGTTGGCCATGGCACTCATACTGCATCAACACTTGCAGGCAATGAGGTCCCAAATGCAAGTCTCTTTGGGTTTGCCAATGGCACTGTTCGCGGTGCTGTCCCATCAGCTAGGTTGGCTATTTACAAAGTATGTTGGGCATTTGGTTGTGCAGATATGGACATACTTGCTGCATTTGATGCTGCTATACATGATGGTGTGGATGTCATATCCATTTCCTTAGGTGGAGAAAGTCCTAGTTATGTTCATGACTCTATTTCAATTGGTGCATTTTTTGCCATGAGGAATGGTATAATCACAGTGGCCTCAGCTGGAAATGAGGGTCCCATTATGGCAACTGTAACAAATACTGCCCCATGGATTGTAACCGTAGCAGCTAGTGGCATTGACAGGACTTTCGAGAGCACTATACAGTTGGGAAGTGGAAAGAATGTTTCTGGTGTAGGAGTGAGCTGTTTCAATCCAAAACGAGAAAAGTACCCCCTTGTCAATGGGATTGATGCAGCCATGACCTCGGAAAGCAAGGAAGCTGCTGAATTCTGCTATGAAGACTCCCTAGAGCCGAGTAAGGTGAAGGGAAAGCTTGTTTACTGCAAATTAGGAACATGGGGCACTGAAGCTGTTGTGAAAGAAATTGGAGGCATCGGTACTATAATAGAAAGTGAGCAATATCTTAATGTTGCTGAAGTTTTCATGGCTCCTGCTACCATTGTGAACAATAGCATAGGTGACATTATTACAAATTATATACATTCCACAAGATCACCATCAGCAGTGATATCCAAGAGCCATGAAGTAAAAATTCCAGCTCCATTTGCTGCTATATTCTCATCTAGAGGTCCAAATCCAGGATCTCAACATGTTCTCAAGCCTGATATTGCAGCTCCTGGCATTGACATCTTGGCATCCTATACTCTTAGGAAATCAATCACAGGTTTAAAAGGGGATAAACAATTTTCAGAATTTACTCTAATGTCTGGGACTTCCATGGCATGTCCTCATGTTGCTGGTGTAGCAGCATATGTGAAGTCATTTCACCCAGATTGGACTCCTGCTGCAATCAGATCTGCTATTATAACAACAGCCAAACCTATGAGCAGGAGACTTAACAATGAAGCAGAATTTGCCTATGGTTCTGGTCAATTAAACCCTACAAAAGCTTTGAGCCCTGGTTTGGTCTATGACATGGATCACTTTGCTTATATCCAGTTCTTATGTCATGAGGGTTACAATGGTTCCAGTTTATCAGTATTTGTTGGTTCTCCTGTAAACTGCACCTCTTTGCTTCCTGGGCTTGGCTATGATGCTATCAACTATCCCAGCATGCAACTTAAATTGGAAAGCAACAAAAGCACAACAGTAGGAGTTTTTAGGAGAAGAGTGACCAATGTAGGTCCTGCTCCAACCATCTACAATGCCACCATTAGATCACCAAAAGGAGTGGAAATCACAGTGAAGCCCACTAGCCTAATTTTTTCTCAAACCCTGCAGAAGAGGAGCTTCAAAGTAGTTGTGAAAGCCAAATCTATGGCAAGTGTGCAAATTGTATCAGGTTCTCTTATTTGGAAAAGCCCACGTTACACTGTGAGGAGCCCTATTGTTATCTACAGTCCATAA 2244 0.4198 MSLLSMFLHNLTKSFSLLWLQLLLILLSSASVNGVEQKNFYIVFMGAHPVTRDIASETHLNVLSAVKGSYLDAKESMVYSYSKSFNAFAAKLSEDEANKLSAMDEVLLVSQNQYRKLHTTRSWNFIGLPLTAKRRLKLESDIVVALLDSGITPESKSFKDDGFGPPPAKWKGDCGNYANFSGCNNKIIGAKYFKGDGIPDPTDILSPIDIVGHGTHTASTLAGNEVPNASLFGFANGTVRGAVPSARLAIYKVCWAFGCADMDILAAFDAAIHDGVDVISISLGGESPSYVHDSISIGAFFAMRNGIITVASAGNEGPIMATVTNTAPWIVTVAASGIDRTFESTIQLGSGKNVSGVGVSCFNPKREKYPLVNGIDAAMTSESKEAAEFCYEDSLEPSKVKGKLVYCKLGTWGTEAVVKEIGGIGTIIESEQYLNVAEVFMAPATIVNNSIGDIITNYIHSTRSPSAVISKSHEVKIPAPFAAIFSSRGPNPGSQHVLKPDIAAPGIDILASYTLRKSITGLKGDKQFSEFTLMSGTSMACPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSRRLNNEAEFAYGSGQLNPTKALSPGLVYDMDHFAYIQFLCHEGYNGSSLSVFVGSPVNCTSLLPGLGYDAINYPSMQLKLESNKSTTVGVFRRRVTNVGPAPTIYNATIRSPKGVEITVKPTSLIFSQTLQKRSFKVVVKAKSMASVQIVSGSLIWKSPRYTVRSPIVIYSP 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3366g00003 747 Pfam Fibronectin type-III domain 646 744 IPR041469 -
Gabi3366g00003 747 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Gabi3366g00003 747 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Gabi3366g00003 747 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Gabi3366g00003 747 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 118 IPR037045 -
Gabi3366g00003 747 Pfam Subtilase family 140 589 IPR000209 GO:0006508|GO:0008236
Gabi3366g00003 747 Pfam Peptidase inhibitor I9 41 118 IPR010259 -
Gabi3366g00003 747 ProSitePatterns Serine proteases, subtilase family, serine active site. 536 546 IPR023828 -
Gabi3366g00003 747 SUPERFAMILY Subtilisin-like 117 601 IPR036852 GO:0004252|GO:0006508
Gabi3366g00003 747 FunFam Subtilisin-like protease SBT1.5 141 379 - -
Gabi3366g00003 747 Gene3D Peptidase S8/S53 domain 141 607 IPR036852 GO:0004252|GO:0006508
Gabi3366g00003 747 CDD PA_subtilisin_like 345 469 - -
Gabi3366g00003 747 Gene3D - 614 746 - -
Gabi3366g00003 747 SUPERFAMILY Protease propeptides/inhibitors 41 116 - -
Gabi3366g00003 747 CDD Peptidases_S8_3 116 571 IPR034197 -
Gabi3366g00003 747 ProSiteProfiles Serine proteases, subtilase domain profile. 122 597 - -
Gabi3366g00003 747 FunFam Subtilisin-like protease SBT5.3 29 118 - -
Gabi3366g00003 747 Gene3D - 339 475 - -
Gabi3366g00003 747 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 743 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3366g00003 Gabi-Chr3366 39089 46732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3366g00003 30 585 Subtilisin-like Serine Gene Family AT4G00230 64.273 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3366g00003 - - ccaj:109800351 1187.17