Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3361g00003 ATGTTACAAGCGCGGTTCCCTTCAGCATCTTCATCAGGGACCAATTTTGCACAACTTGGAGATACTGATGACGATCCAACAGATTACATTGACTTTAGTGATGAGATTGAATACGACATGCCTCATGAAATGGAAGAGCACATACAAAATGACTCAATTAATAGTATGTCAAATGTCATTCCGTTGACACCGACAAAGAATATTGGTATTTCAATTGAGGTTGGAATGGAATTTTCTGAAAGGAAAGATGTAATAGACTTGTACAAAGCATTTGGTATGGGAAAAGGTTTTGGAATTCGGGCACGACAAACCAAGAAGAATTACATGAAGCTAACGTGTGCTAGAGAGGGTCGTCCAGCACCGAAGACAAACAATGTTGGTGAAGTTTGTGAAACCAAATCAAGGAATACATCATCATCACGCATAGGGTGTAAAGCTTGTCTCAAGGCTTCTATGAATGGAGACACAAACATGTGGAAAGTTACATATTTTGACGACAATCATAATCATGGTTTGGTTACTCCGAAGAGTGTTCCATATATAAGATCATATAGACAAATGCCTGATGTTGCTAGATCATTAGTTGAAAAATTCAATGACTCGGGCTTGCCCACTGGAAAGGTGGCCACCATCCTCAGAGGCCATGATATAATGTTTGACAGTCGAGATTGTTATAATCATATGAAAAATGTAAGGAGGAAAATATATGACGCTGGGGATGCACAAGCTGTGGTACGTTATTGTAATAGACAACAATCAATGAATCCAAATTTCTTTTATTCGATCAAGTACGACGATGACGATCGCATGGAAAGCTTTTTTTGGATTGATGCGAGGTCTAGACACTCATATTACAACGTTGGCGTAAGGAAGGAAATGATGTGCTAA 888 0.3896 MLQARFPSASSSGTNFAQLGDTDDDPTDYIDFSDEIEYDMPHEMEEHIQNDSINSMSNVIPLTPTKNIGISIEVGMEFSERKDVIDLYKAFGMGKGFGIRARQTKKNYMKLTCAREGRPAPKTNNVGEVCETKSRNTSSSRIGCKACLKASMNGDTNMWKVTYFDDNHNHGLVTPKSVPYIRSYRQMPDVARSLVEKFNDSGLPTGKVATILRGHDIMFDSRDCYNHMKNVRRKIYDAGDAQAVVRYCNRQQSMNPNFFYSIKYDDDDRMESFFWIDARSRHSYYNVGVRKEMMC 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3361g00003 295 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3361g00003 295 MobiDBLite consensus disorder prediction 1 26 - -
Gabi3361g00003 295 Pfam FAR1 DNA-binding domain 87 173 IPR004330 -
Gabi3361g00003 295 PANTHER OS01G0519700 PROTEIN 58 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3361g00003 Gabi-Chr3361 16110 18649 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3361g00003 FAR1 1.5e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3361g00003 - - vvo:131633311 224.942