Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3361g00002 ATGGCATCAGATTCAAACGTTAATGCAACCAGCAACACGCTCCAGTCCATATGTTACAAGCGCGGTTCCCTTCAGCATCTTCATCAGATCGATGATACAGGGACCAATTTTGCACAACTTGGAGATACTGATGACGATCCAACAGATTACATTGACTTTAGTGATGAGATTGAATACGACATGCCTCATGAAATGGAAGAGCACATACAAAATGACTCAATTAATAGTATGTCAAATGTCATTCCGTTGACACCGACAAAGAATATTGGTATTTCAATTGAGGTTGGAATGGAATTTTCTGAAAGGAAAGATGTAATAGACTTGTACAAAGCATTTGGTATGGGAAAAGGTTTTGGAATTCGGGCACGACAAACCAAGAAGAATTACATGAAGCTAACGTGTGCTAGAGAGGGTCGTCCAGCACCGAAGACAAACAATGTTGGTGAAGTTTGTGAAACCAAATCAAGGAATACATCATCATCACGCATAGGGTGTAAAGCTTGTCTCAAGGCTTCTATGAATGGAGACACAAACATGTGGAAAGTTACATATTTTGACGACAATCATAATCATGGTTTGGTTACTCCGAAGAGTGTTCCATATATAAGATCATATAGACAAATGCCTGATGTTGCTAGATCATTAGTTGAAAAATTCAATGACTCGGGCTTGCCCACTGGAAAGGTGGCCACCATCCTCAGAGGCCATGATATAATGTTTGACAGTCGAGATTGTTATAATCATATGAAAAATGTAAGGAGGAAAATATATGACGCTGGGGATGCACAAGCTGTGGTACGTTATTGTAATAGACAACAATCAATGAATCCAAATTTCTTTTATTCGATCAAGTACGACGATGACGATCGCATGGAAAGCTTTTTTTGGATTGATGCGAGGTCTAGACACTCATATTACAACGTTGGCGTAAGGAAGGAAATGATGTGCTAA 951 0.3933 MASDSNVNATSNTLQSICYKRGSLQHLHQIDDTGTNFAQLGDTDDDPTDYIDFSDEIEYDMPHEMEEHIQNDSINSMSNVIPLTPTKNIGISIEVGMEFSERKDVIDLYKAFGMGKGFGIRARQTKKNYMKLTCAREGRPAPKTNNVGEVCETKSRNTSSSRIGCKACLKASMNGDTNMWKVTYFDDNHNHGLVTPKSVPYIRSYRQMPDVARSLVEKFNDSGLPTGKVATILRGHDIMFDSRDCYNHMKNVRRKIYDAGDAQAVVRYCNRQQSMNPNFFYSIKYDDDDRMESFFWIDARSRHSYYNVGVRKEMMC 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3361g00002 316 Pfam FAR1 DNA-binding domain 108 194 IPR004330 -
Gabi3361g00002 316 PANTHER OS01G0519700 PROTEIN 79 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3361g00002 Gabi-Chr3361 16110 18649 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3361g00002 FAR1 1.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3361g00002 - - vvo:131633311 224.942