Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3358g00001 ATGTCTAACACTGACGGAATAACTAACGCCGTTAGCAACGGCGCTCTGGTGGTGAAGAAGCCTCCGTCGAAGGACCGTCACAGCAAGGTCGACGGTCGCGGACGACGGATACGGATGCCGATCATATGCGCCGCACGTGTGTTCCAGCTCACACGTGAGCTTGGCCACAAGTCCGACGGTCAAACCATTGAGTGGCTCCTCCGCCAGGCCGAGCCTTCAATCATCGCCGCCACCGGCACCGGCACCACCCCGGCCACCTTCTCCGCCGTCTCCGACCACAAACCCTTGCTCCCTCCCTCTCCCTTCATTCTCGGAAAGAGGATACGACCCGACGACGACGACGCCGCCGCAAAGGACGACGCCACCGCCGTCTCCTTAGTCGGACCTCCCACTCCCGCCGGTCTCTGGGCCCTTCCGGCCAGGCCAGACTTCTGGAGTTTCGCCGCAGCTGCACCACCGGAACTCATGTCGCAGCAACAGCATGGTTCGTTGTTTCATCATCAGCAACAGCAACAACAACAACAACAAGCCGCCATGGGAGAAGCTTCAGCGGCGAGGCTGGGGAATTACCTTCCTGGACATCTGAATTTGCTGGCTTCGTTGTCCGGAGGACACGGAAATTCTGGCCGGAGAGACGAAGAGCCTCGTTGA 651 0.6022 MSNTDGITNAVSNGALVVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPATFSAVSDHKPLLPPSPFILGKRIRPDDDDAAAKDDATAVSLVGPPTPAGLWALPARPDFWSFAAAAPPELMSQQQHGSLFHHQQQQQQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDEEPR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3358g00001 216 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 183 IPR005333 GO:0003700
Gabi3358g00001 216 MobiDBLite consensus disorder prediction 1 31 - -
Gabi3358g00001 216 ProSiteProfiles TCP domain profile. 23 77 IPR017887 -
Gabi3358g00001 216 MobiDBLite consensus disorder prediction 158 180 - -
Gabi3358g00001 216 Pfam TCP family transcription factor 23 157 IPR017887 -
Gabi3358g00001 216 MobiDBLite consensus disorder prediction 158 181 - -
Gabi3358g00001 216 Pfam Androgen receptor 108 184 IPR001103 GO:0003677|GO:0004879|GO:0005496|GO:0005634|GO:0006355|GO:0030521
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3358g00001 Gabi-Chr3358 13404 15980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3358g00001 12 216 TCP Transcription Factor Family AT5G23280 64.583 2.47e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi3358g00001 TCP 2.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3358g00001 K16221 - gmx:100795254 298.516