Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3350g00022 ATGAAGTTCACAGATTTGCTCTTTGCTCTGAAACCTCTCTTTCCAATACTAATAGCTGTAATTTTATCTGCTTTTATTATCAAAATCCATGGGGGTAGATTTTCTGACAGGAAAAGAAGATATCACCCAGTTGCTGGCACTGTCTTGCACCAACTCTTCAACTTTCATAGGCTGCTTGACTACATGACCAACCTTACCAGCCATAGGAAAACTTACAGGTTGCTTAGCTTCATCAGAAGTGAGGTTTACACTGCAGACCCTGTTAATATTGAGCATATCCTGGTCACAAACTTTGGAAACTATGGCAAGGGTTGGTATCACCACAGTGTCTTGACAGATCTTCTAGGAGATGGCATTTTCACAGTGGATGGAGAGAAGTGGCGACATCAGAGGAAGGCAGCAAGCTATCAATTCTCAACCAAGCTATTAAGAGAATTCAGCAGTTCAGTGTTCAAATCCAATGCAGTAAAACTTGCAGGGATAATTTCTGAAGCTGCAATCTCAAACAATATTATTGAGCTGCAGGATCTGTTCATGAAATCAGCTCTAGATTCTGTATTCAAGGTTGTCCTTGGTGTAGAACTAGACACCATGTGTGGAACCTATAAAGAAGGCACACAGTTCTCAAATGCTTTTGATGAAGCAAGTGCTGCTATCATGTTTCGGTATTTTAACTTTCTCTGGAGGTTACAACGGTTCCTGAACATTGGATCGGAAGCAGTACTTAGTAAAAGTCTAAGAGTGATTGATGAATATGTGAATAAACTAATCAGAAGCAAGATTGAGCAAGCCCAAAAGCTACAAGATAATTCTCCTGGGATGAAAGGAGACATTTTGTCAAGGTTTATAGAATTGAAAGAGACAGATCCAAAGTATCTTAAAGACATTATCTTGAGTTTTATAATTGCAGGGAAAGATACAACAGCAATTACTCTTTCTTGGTTCCTATACCAACTCTGCAAGCATCCTCATGTGCAGGAGAAGATTGCACAAGAAATAAGGGAGGCAACAAGAGTAGCAGATGGATCAACAGTTGATGAACTTGCAGCTAGTGTAACTGAAGAAAACCTTGAAAAGATGCAGTATCTGCATGCAGCTTTGACAGAAACACTCAGGCTCCACCCAGCAGTTCCAGTGGAAGGAAAGTTTTGTTTTTCAGATGACACGTGGCCAGATGGATTTAGTGTCAAGAAAGGTGATCTTGTGTCATTCCTACCATATGTAATGGGAAGGATGAAATTCTTGTGGGGTGAAGATGCTGAAAAATTCAGGCCTCAGAGATGGCTTGATGAAAATGGAATTTTCCAAAAAGAAAGTCCTTTTAAGTTCACAGCTTTCCAGGCGGGTCCAAGAATTTGCCTGGGAAAGGAGTTTGCATACAGACAGATGAAGATGTTTTCTGCAATCCTTTTAGGTAGCCACAGCTTCAAACTGGCAGAGCAAAATAAATCTGTAAAATACAAAACCTCACTCACTCTACAAATTGATGGTGGCCTTCATGTCTATGCTTCTCAGAGAGGGAAATAA 1527 0.4021 MKFTDLLFALKPLFPILIAVILSAFIIKIHGGRFSDRKRRYHPVAGTVLHQLFNFHRLLDYMTNLTSHRKTYRLLSFIRSEVYTADPVNIEHILVTNFGNYGKGWYHHSVLTDLLGDGIFTVDGEKWRHQRKAASYQFSTKLLREFSSSVFKSNAVKLAGIISEAAISNNIIELQDLFMKSALDSVFKVVLGVELDTMCGTYKEGTQFSNAFDEASAAIMFRYFNFLWRLQRFLNIGSEAVLSKSLRVIDEYVNKLIRSKIEQAQKLQDNSPGMKGDILSRFIELKETDPKYLKDIILSFIIAGKDTTAITLSWFLYQLCKHPHVQEKIAQEIREATRVADGSTVDELAASVTEENLEKMQYLHAALTETLRLHPAVPVEGKFCFSDDTWPDGFSVKKGDLVSFLPYVMGRMKFLWGEDAEKFRPQRWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKMFSAILLGSHSFKLAEQNKSVKYKTSLTLQIDGGLHVYASQRGK 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3350g00022 508 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 Pfam Cytochrome P450 55 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 SUPERFAMILY Cytochrome P450 41 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 PANTHER CYTOCHROME P450 27 501 - -
Gabi3350g00022 508 Gene3D Cytochrome P450 38 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3350g00022 508 CDD CYP86A 70 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3350g00022 Gabi-Chr3350 277709 280321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3350g00022 16 506 Cytochrome P450 AT2G45510 51.807 2.53e-175 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3350g00022 - - pvu:PHAVU_007G063800g 820.846