Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3350g00018 ATGGCTAACAGTCCAATCACTCCAATGGAAAATATAGGTTTCGTTCTAATAAGCTATCTCCTTTTGAGTATAGTCTTATCTGCAAATGCTCAATTTGTCAAGAAGACTTACATCATTCAAATGGATAAGTCAGCAAAACCAGACACTTACTCCAATCACCTTGAGTGGTATTCATCAAAAGTGAACTCAGTACTGTCCAAATCGGTAGAAGCTGAGATGGACAAGGAAGAAAGAATCATTTACAGTTACCATACTGCTTTTCATGGAGTTGCTGCCAAATTGAGCCAAGAAGAAGCTCAGAAGCTAGAAGCAGAAGAAGGTGTTGTGGCCATATTCCCTGATACAAGGTATCAGCTACACACCACAAGAAGTCCAGCTTTTCTTGGCCTTGAACCAATGCATAGCACTAACATCTGGTCAGAAAAGGTAACTGACCATGATGTTGTAGTGGGAGTGTTAGACACTGGGGTTTGGCCAGAGAGTGAGAGCTTCAACGACACAGGCATGAGACCAGTACCTGCTCACTGGAAAGGTGCCTGTGAGACTGGGCGAGGCTTCGGTAAACATCACTGCAATAAGAAGATTGTAGGGGCGAGAATATTCTACCGTGGATATGAAGCAGCAACAGGTAGAATTGATGAGAAAACTGAATACAAATCACCAAGAGATCAAGATGGTCATGGCACTCACACAGCAGCTACAGTTGCTGGCTCTCCAGTACGTGGTGCTAATCTTCTGGGCTATGCTTATGGCACAGCCAGAGGAATGGCACCGGGAGCAAGAATTGCATCTTACAAAGTGTGCTGGACTGGTGGATGCTTCAGCTCAGATATTCTGTCAGCAGTTGATAGAGCTGTAGCTGATGGAGTGAATGTTCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTACTACCATGATAGTTTATCTGTAGCTGCATTTGGAGCAATGGAGATGGGTGTTTTTGTTTCATGCTCTGCAGGAAATGCAGGACCTGACCCTGTCACCATTACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCAGCAGATGTTAAGCTTGGAAATGGAAAAAAGTTAACCGGTACCTCACTCTATAAAGGGAGAAGCATGCTCTCAGTTAAGAAGCAATACCCTTTGGTATACATGGGTGGTAACTCAAGTAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGGACTTTGGATCGTCGAATGGCTTCAGGAAAGATTGTGATTTGTGACAGAGGCATTAGTCCTCGAGTGCAGAAGGGTCAGGTGGTGAAAAATGCAGGAGGCATTGGAATGATTCTTACAAACACTGCAGCTAATGGAGAAGAGTTGGTTGCAGACTGTCACCTCATTCCAGCTATTGCAGTTGGAGAGAAAGAAGGCAAGGAACTCAAACACTATGTCTTAACAAGGAAAAAAGCTACTGCAACTCTAGCTTTTCAGGATACGAGGTTGGGAATTAGACCATCTCCTGTAGTAGCAGCATTTTCATCAAGAGGGCCTAATCTTCTTACCCTTGAAATTCTGAAGCCTGATGTTGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGGGATTGTTGGTCCATCAAGTTTACCAACAGATCATAGGAGGGTGAAGTTCAATATACTCTCTGGAACTTCAATGTCATGCCCTCATGTTAGTGGTGTTGCTGCATTGCTCAAGGCTAGGCATCCAGAATGGAGTCCAGCTGCAATAAAATCTGCCTTGATGACAACAGCTTATGTTCATGACAACACCATCAAGCCTCTCAGAGATGCCTCAAGTGCTGAACCTTCAACTCCTTATGATCATGGTGCTGGACACATTAACCCCAGAAAAGCTCTTGACCCAGGTCTAGTCTATGATATTAAGCCACAGGATTACTTTGATTTCCTTTGCACACAGAAGCTAACTCCTTCCCAACTAGGAGTGTTTGCCAAACATTCAAAAAGAACTTGCAGGCACTCTCTTGCTAGTCCAGGGGACTTGAACTACCCAGCTGTATCAGTACTGTTTCCAGAAAAAACATCCATTTCAACTTTGACCATTCATAGAACTGCCACTAATGTTGGCCCTCCTGTTTCCAAATACCATGTTATGGTTTCACCATTTAAAGGAACTTCTGTCAAAGTTGAGCCAGACACCCTGAATTTTACCAGGAAATACCAGAAACTATCTTACAAGATTACCTTCACAGCAAAGTCTCGGCAAACAGAACCTGAATTTGGGGGTTTGGTATGGAAGGATGGTGTGCACAAGGTAAGAAGCCCAATTGTAATAACATATCTGCCACCAATATGA 2340 0.4393 MANSPITPMENIGFVLISYLLLSIVLSANAQFVKKTYIIQMDKSAKPDTYSNHLEWYSSKVNSVLSKSVEAEMDKEERIIYSYHTAFHGVAAKLSQEEAQKLEAEEGVVAIFPDTRYQLHTTRSPAFLGLEPMHSTNIWSEKVTDHDVVVGVLDTGVWPESESFNDTGMRPVPAHWKGACETGRGFGKHHCNKKIVGARIFYRGYEAATGRIDEKTEYKSPRDQDGHGTHTAATVAGSPVRGANLLGYAYGTARGMAPGARIASYKVCWTGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYHDSLSVAAFGAMEMGVFVSCSAGNAGPDPVTITNVSPWITTVGASTMDRDFPADVKLGNGKKLTGTSLYKGRSMLSVKKQYPLVYMGGNSSSPDPRSLCLEGTLDRRMASGKIVICDRGISPRVQKGQVVKNAGGIGMILTNTAANGEELVADCHLIPAIAVGEKEGKELKHYVLTRKKATATLAFQDTRLGIRPSPVVAAFSSRGPNLLTLEILKPDVVAPGVNILAAWSGIVGPSSLPTDHRRVKFNILSGTSMSCPHVSGVAALLKARHPEWSPAAIKSALMTTAYVHDNTIKPLRDASSAEPSTPYDHGAGHINPRKALDPGLVYDIKPQDYFDFLCTQKLTPSQLGVFAKHSKRTCRHSLASPGDLNYPAVSVLFPEKTSISTLTIHRTATNVGPPVSKYHVMVSPFKGTSVKVEPDTLNFTRKYQKLSYKITFTAKSRQTEPEFGGLVWKDGVHKVRSPIVITYLPPI 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3350g00018 779 Gene3D Peptidase S8/S53 domain 147 641 IPR036852 GO:0004252|GO:0006508
Gabi3350g00018 779 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Gabi3350g00018 779 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Gabi3350g00018 779 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Gabi3350g00018 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 38 772 IPR045051 -
Gabi3350g00018 779 FunFam Subtilisin-like protease SBT1.5 147 364 - -
Gabi3350g00018 779 FunFam Subtilisin-like protease SBT1.9 25 120 - -
Gabi3350g00018 779 FunFam subtilisin-like protease SBT1.5 353 496 - -
Gabi3350g00018 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 120 IPR037045 -
Gabi3350g00018 779 Gene3D - 353 496 - -
Gabi3350g00018 779 Pfam PA domain 385 475 IPR003137 -
Gabi3350g00018 779 CDD Peptidases_S8_3 117 594 IPR034197 -
Gabi3350g00018 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Gabi3350g00018 779 Pfam Subtilase family 146 599 IPR000209 GO:0006508|GO:0008236
Gabi3350g00018 779 SUPERFAMILY Protease propeptides/inhibitors 35 118 - -
Gabi3350g00018 779 CDD PA_subtilisin_like 359 489 - -
Gabi3350g00018 779 Gene3D - 645 776 - -
Gabi3350g00018 779 Pfam Peptidase inhibitor I9 36 120 IPR010259 -
Gabi3350g00018 779 ProSiteProfiles Serine proteases, subtilase domain profile. 116 628 - -
Gabi3350g00018 779 SUPERFAMILY Subtilisin-like 119 632 IPR036852 GO:0004252|GO:0006508
Gabi3350g00018 779 Pfam Fibronectin type-III domain 675 773 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3350g00018 Gabi-Chr3350 215250 217749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3350g00018 14 779 Subtilisin-like Serine Gene Family AT5G51750 72.005 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3350g00018 - - gmx:102661592 1389.4