Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3350g00012 ATGTCCCTACACGTAGTGTTTAGTGCATTCTCCTTGTATCTTCTTCTATTTGTTGTTAACTCGTCTATGGATCCCTACAAGGCACTCCACATCATCCTCAACCCAGACGGCACACTCACACGCTTAGAAATACCCCCACAAAGCCCTCCCTCACCCGATCCTACACTCTCCACACCCGTTCTCTCTAAAGACCTCACCATCAACCAATCAAACCACACCTGGGCTCGAATCTACCTACCCCACAAAGCACTGGATAATCCTCCCCACTTCAAATTACCCCTCATTGTCTTTTACCATGGTGGCGGCTTCCTCTTCTACAGCGCCGCCTCTACTTACTTCCACAATTTCTGCGTCAACTTGGCCAACCAAACCCAATCCGTCGTCGTTTCAGTCGACTACCGTCTCGCCCCGGAGCACCGTCTGCCGGCGGCCTATGAAGACTCCGTAGAAGCCCTTCACTGGATCAAAAGATCCAAAGATTTGTGGTTGACACGTCACGCTGATTACTCCCGTTGTTATCTCATGGGGGAGAGTGCTGGGGGTAATATTGCCTACAACGCGGGTCTACGTGCAGCAGCGGAAGTTGATAAGATCAAACCGCTGAAGATACAAGGGCTCGTATTAATTCAACCCTTTTTTGGTGGGACCAAGAGAACCCCATCAGAGTTGAGGCATGCCGACGATTCGACTATACCTCTGCCTATTACTGATCTGATGTGGAATCTGTCATTGCCCATTGGCGTTGACCGGGATTACGAGTATTCCAATCCAACGGTGACGGCAGGGGCTAAGGTTTTGGATCAAATCAAGTTGCTTGGATGGAGATTTGCCGTGTTTGGCTGTGATGGGGACCCACTATTGGACCGTGGTAAGGAGTTGGTGAAACTGCTCGAGGACAAGGGTATGCATGTGGTGGGACAATTTTATGGTGGAGGTCGACATGGGATTTTTGTCGGTGACCCTTCCATGTCCGAGAAAGTCTTTGATTTAGTTAAAAGTTTTTATTCATGA 1011 0.4926 MSLHVVFSAFSLYLLLFVVNSSMDPYKALHIILNPDGTLTRLEIPPQSPPSPDPTLSTPVLSKDLTINQSNHTWARIYLPHKALDNPPHFKLPLIVFYHGGGFLFYSAASTYFHNFCVNLANQTQSVVVSVDYRLAPEHRLPAAYEDSVEALHWIKRSKDLWLTRHADYSRCYLMGESAGGNIAYNAGLRAAAEVDKIKPLKIQGLVLIQPFFGGTKRTPSELRHADDSTIPLPITDLMWNLSLPIGVDRDYEYSNPTVTAGAKVLDQIKLLGWRFAVFGCDGDPLLDRGKELVKLLEDKGMHVVGQFYGGGRHGIFVGDPSMSEKVFDLVKSFYS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3350g00012 336 SUPERFAMILY alpha/beta-Hydrolases 32 331 IPR029058 -
Gabi3350g00012 336 Pfam alpha/beta hydrolase fold 95 317 IPR013094 GO:0016787
Gabi3350g00012 336 Gene3D alpha/beta hydrolase 26 336 IPR029058 -
Gabi3350g00012 336 PANTHER ARYLACETAMIDE DEACETYLASE 31 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3350g00012 Gabi-Chr3350 136793 137969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3350g00012 36 336 Carbohydrate Esterase AT5G16080 36.102 1.28e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3350g00012 - - var:108324928 526.554