Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3350g00011 ATGTCAGGCCAACCTCTCTCCCCTCACGCCGTTGATCCTTTTCAACATCTCAAAATCTTTCTTAACTCCGACGGCACCCTCAGTCGCCTGCGCGAAGACCCACACACCTCACCCTCACCCGATCCCAACCTTCCCATCCCCGTTCTCACCAAAGACGCTCCCATCAACCAATCAAACAACACCTTTGCTCGCATATTCCTACCCCGCAAAGCACTCGATCATTCCTCCTCCTTCCCAACCAAGCTCCCTCTCATCGTTTACTTCCATGGGGGCGGCTTCATTTTATTCAGTGCAGCCTCAAATTTCTTTCACGATCTCTGCGTAAACCTCGCAAAAGACGTCGGATCCATCGTCGTATCCGTAGAATACCGTCTTGCTCCAGAACACCGATTGCCGGCTGCGTACGACGATGCCGTGGAAGCGCTGCACTGGATCAAAGCCCAATCAAATGATTGGTTGACAAACTATGCCGATTATTCAAATTGTTACCTCATGGGAACTAGTTCCGGAGCAAACATCGCATACCGCGCGGGTCTACGTGCTGCTGCGGCGGTTGACCATTATTATCTGGATCCGCTTAAGATCAAAGGGCTGATATTGGCTCAACCGTTTTTTGGTGGGACCAAGAGGGTACCCTCGGAGCTAAGGCTGGAGAACGATCTGGTTCTGCCACCGCACGTGAGTGACATGATGTGGGAGTTGTCGTTGCCCGTTGGGGTTGACCGTGATCATGAGTATTGCAATCCAAGGGCTGGGGATGGAGCTAGGGTTTTGGATAGGGTGAGACAGCTTGGGTGGAGGGTGGTGGTGACAGGGTGCGATGGGGACCCACTGGTGGACCATCAAATGGCACTGGCGAGACTGATGGAGGAGAAGGGTGTAGCAGTGGTGAGTCGTTTTGTAGAAGGGGGTTGTCATGGCGCTGAGGTTCGTGATCCCATAAAGCAAAAGCAACTTCATGACCTAGTCAAAGATTTCATTGCTTCATAG 990 0.5222 MSGQPLSPHAVDPFQHLKIFLNSDGTLSRLREDPHTSPSPDPNLPIPVLTKDAPINQSNNTFARIFLPRKALDHSSSFPTKLPLIVYFHGGGFILFSAASNFFHDLCVNLAKDVGSIVVSVEYRLAPEHRLPAAYDDAVEALHWIKAQSNDWLTNYADYSNCYLMGTSSGANIAYRAGLRAAAAVDHYYLDPLKIKGLILAQPFFGGTKRVPSELRLENDLVLPPHVSDMMWELSLPVGVDRDHEYCNPRAGDGARVLDRVRQLGWRVVVTGCDGDPLVDHQMALARLMEEKGVAVVSRFVEGGCHGAEVRDPIKQKQLHDLVKDFIAS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3350g00011 329 Pfam alpha/beta hydrolase fold 85 307 IPR013094 GO:0016787
Gabi3350g00011 329 PANTHER ARYLACETAMIDE DEACETYLASE 20 307 - -
Gabi3350g00011 329 Gene3D alpha/beta hydrolase 14 329 IPR029058 -
Gabi3350g00011 329 MobiDBLite consensus disorder prediction 30 50 - -
Gabi3350g00011 329 SUPERFAMILY alpha/beta-Hydrolases 31 327 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3350g00011 Gabi-Chr3350 130117 131509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3350g00011 17 323 Carbohydrate Esterase AT5G16080 35.423 1.11e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3350g00011 - - gmx:100777786 482.256