Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3348g00033 ATGCTGCGTTTGTGCTACCGTCCTCTCGATTGTTGCTTTCGACGCCGTGGTGCCGGTGCTGACGGTCTTCTCTGGCACGCTGATTTGAAGCCTCACGCCTCCGGCGACTTCTCCATCGCCGTCGCTCAAGCCAATTACAGTCTCGAAGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACTTACATCGGTGTCTACGACGGCCACGGCGGACCCGAAGCTTCTAGATTCGTCAACAAGCATCTCTTCCCTTATTTGCACAAATTTGCCACTGAGCAAGGGGGGTTGTCGGTGGATGTGATAAAGAAGGCGTTTAGTGCCACGGAGGAGGAATTCTTGCACTTGGTGAAGCTATCGTTGCCCATTAGTCCCCAGATTGCTTCCGTAGGATCTTGTTGTCTTCTTGGTGCAATTTCTAATAATGTGTTGTATGTTGCCAACCTCGGAGACTCTAGAGTTGTTCTTGGCAGGAGGGATACGGAGAGCAAAAATTCTTCCGTGGTGGCAGAGCGCTTGTCAACGGATCATAATGTAGCTGATGAGGAGGTGAGAAGAGAAGTTGAAGCTCTTCATCCTGATGACTCACACGTTGTGGTCTATAGCCGGGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCTATTGGTGATGTGTATTTGAAGAGACCTGATTTCTATAGAGACCCAGTTTTTCAGCAATTTGGAAATCCCATTCCTTTGAAGCGTCCTGTAATGACCGCTGAACCATCAGTCATTATTAGGGAGCTTGAATCAGGAGATTTATTCTTGATATTTGCATCAGATGGCCTTTGGGAACAATTAAGTGATGAAGCAGCAGTTGAGATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCTGCTCTTCAGGAAGCTGCAAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATTGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTTATTGTAATCTATCTTGATCACCATGCGGGCTCCTCTAGTGGTAGATTTAAGCAAACTGCTGTTGGCTATACAACGGCCCCTGTTGATATCTTTTCCCTCAATGCGGATGAGGCAGAACAGAGTATGCTTGGTACAGTTGCCTAA 1143 0.4672 MLRLCYRPLDCCFRRRGAGADGLLWHADLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKHLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLLGAISNNVLYVANLGDSRVVLGRRDTESKNSSVVAERLSTDHNVADEEVRREVEALHPDDSHVVVYSRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPIPLKRPVMTAEPSVIIRELESGDLFLIFASDGLWEQLSDEAAVEIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHAGSSSGRFKQTAVGYTTAPVDIFSLNADEAEQSMLGTVA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3348g00033 380 CDD PP2Cc 49 338 IPR001932 -
Gabi3348g00033 380 Pfam Protein phosphatase 2C 57 307 IPR001932 -
Gabi3348g00033 380 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Gabi3348g00033 380 SMART PP2C_4 30 336 IPR001932 -
Gabi3348g00033 380 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
Gabi3348g00033 380 FunFam Probable protein phosphatase 2C 42 27 346 - -
Gabi3348g00033 380 PANTHER PROTEIN PHOSPHATASE 35 337 IPR015655 GO:0004722|GO:0006470
Gabi3348g00033 380 Gene3D - 28 346 IPR036457 -
Gabi3348g00033 380 SMART PP2C_SIG_2 38 338 IPR001932 -
Gabi3348g00033 380 SUPERFAMILY PP2C-like 45 340 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3348g00033 Gabi-Chr3348 233601 236460 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3348g00033 21 345 PP2C-type Phosphatase Gene Family AT3G51370 57.357 3.58e-141 404