Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3348g00015 ATGATTATCAAGGAAGATGAAACAACTCTTACAACAGCCAAGGAACAACCAGGTGAAGTGATTAACAGAGACAAGAACAATGATGGAAGTGAAGATGACAATCCCGAAGAGTGGTTGAACCTGAGCTTAGGAGGCACTGCACTCTCAACAGCAGGAGACCCTGATTCACAACCAAGACCAGCTACTACCAAAGTTTTTTCGTGCAACTTCTGCATGAGGAAGTTCTTTAGTTCACAAGCATTAGGGGGTCATCAGAATGCTCACAAAAGGGAAAGAGGTGCTGCCAGAAGATTTCAATCTCAGAGGACTATGGCAATAATGGGCTTGCCCATGAACACTCCTATGATTCGATCACTTGGTGTCCAGCCCCATTCACTCGTGCACAAGCCATGCAGAGGAGGAACTATGTTGGCACCGAGCTTCCATGATTCATATGCAGGGCTTGGAATGGCATGGACACCTTTCACACCTGAGGATCAAACGGATCTGGTGTGGCCAGGCAGCTTTCGTTTGGTTACACAACAGCCCCAGCTACCTCAGGAGTCACTCAAGCTTGATTTAGACCTCAGACTCTGA 576 0.4722 MIIKEDETTLTTAKEQPGEVINRDKNNDGSEDDNPEEWLNLSLGGTALSTAGDPDSQPRPATTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRFQSQRTMAIMGLPMNTPMIRSLGVQPHSLVHKPCRGGTMLAPSFHDSYAGLGMAWTPFTPEDQTDLVWPGSFRLVTQQPQLPQESLKLDLDLRL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3348g00015 191 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 191 - -
Gabi3348g00015 191 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Gabi3348g00015 191 Gene3D Classic Zinc Finger 54 108 - -
Gabi3348g00015 191 MobiDBLite consensus disorder prediction 1 32 - -
Gabi3348g00015 191 MobiDBLite consensus disorder prediction 1 39 - -
Gabi3348g00015 191 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Gabi3348g00015 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3348g00015 Gabi-Chr3348 107080 108197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3348g00015 2 179 C2H2 Transcription Factor Family AT1G24625 36.111 1.25e-22 89.0