Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3348g00009 ATGGAGGCCAAGGAGGAATTTGAAGTGGACCATCTGATGACACCCACAGGGACCAGTTTCTCTGAGTTACTATTCGGAGAGGACGATGATAATGAGAATGCATTGGGTGTCGGTGTGGACCAGACCTACAACCTTAGCCATTCCCCTGTTTTCTCCATTCACAAGACACCCAAAATGCTTTGCTTTGGTAACTATCAAAATGAATGTGACCTATTGCTTTCTGAAACCAACGCTACCACTCAGAAATCTGTCATCACTTCCAGTGATTCTTCATCTGCTTCTTCCTGCAACTACAGCAACACCGGCTTCAATTCCTTACCTAAGTCTAATAGTTTGCAGAAAAAGCGAAATGGATCGGGACAAGAACCGGTGACGACCAGGGCAGGTTCTGGAGGCCAGAGACCACCTAAGAAGACCAAAGCAGAGAATCCTAATTCAACCGGACATGCAAAGCAGAGGAAGGAGAAGCTTGGGGAACGAATTGCAGCATTACAACAGCTTGTTTCACCCTTCGGCAAGACAGATACAGCTTCAGTGCTTCACGAGGCCATGGGGTATATAAGATTTCTACATGACCAAGTTCAGGTCCTGTGCTCCCCTTACCTGCAACATTTGCCTTCCTCAAACCACCAACTTGAGCATCAGCATGGGGACGGAGATAACAAGGGAGAGGAAGTGAAGAAGGACTTGAAGAGCATGGGTCTCTGCTTGATCCCAGTGGGATGCACCGTACACGTGGCAAGTAGCAATGGTGCTGATTTCTGGTCACCTGCTGCAATAGGGAACAATGTTTCACCATCAGCTAAGCAGTAA 813 0.4748 MEAKEEFEVDHLMTPTGTSFSELLFGEDDDNENALGVGVDQTYNLSHSPVFSIHKTPKMLCFGNYQNECDLLLSETNATTQKSVITSSDSSSASSCNYSNTGFNSLPKSNSLQKKRNGSGQEPVTTRAGSGGQRPPKKTKAENPNSTGHAKQRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQHLPSSNHQLEHQHGDGDNKGEEVKKDLKSMGLCLIPVGCTVHVASSNGADFWSPAAIGNNVSPSAKQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3348g00009 270 MobiDBLite consensus disorder prediction 104 128 - -
Gabi3348g00009 270 Gene3D - 147 228 IPR036638 GO:0046983
Gabi3348g00009 270 FunFam Transcription factor bHLH113 133 204 - -
Gabi3348g00009 270 CDD bHLH_AtbHLH_like 150 197 IPR045239 -
Gabi3348g00009 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Gabi3348g00009 270 SMART finulus 147 196 IPR011598 GO:0046983
Gabi3348g00009 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 203 IPR036638 GO:0046983
Gabi3348g00009 270 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 48 245 - -
Gabi3348g00009 270 MobiDBLite consensus disorder prediction 104 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3348g00009 Gabi-Chr3348 74967 76791 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3348g00009 150 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 54.545 2.59e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3348g00009 - - gmx:100809317 384.8