Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3341g00057 ATGAGGAGGAACTGCAACTTAGAACTTCGCCTTTTTCCTTCCTGCGATTCCGATCCCCAACCAATGATGGAAGCAGAAGCCGGTGAGAGCCCACTACAACAATCCCACCGCCAAGACAACCACCACCACCAGAACCAGCAACAACCGTTGACTATTTTCTATGATGGCAAGATTTGCGTTTGTGATGTCACAGAGCTTCAGGCGAGATACATTTTAATGCACGCAAATAAAGAGATGGAGCAAAGAATGAAGACACCAACTGGGTCAGAGCCATCTTCACCAAACTTATATAGCCCTGGCACTGGTCTTTCCATGAAAAGATCGCTTCAGAGGTTTCTCCAGAAGAGGAAGAATCGGATCCAAGAAGCATCCCCATACCATCACTAG 387 0.4703 MRRNCNLELRLFPSCDSDPQPMMEAEAGESPLQQSHRQDNHHHQNQQQPLTIFYDGKICVCDVTELQARYILMHANKEMEQRMKTPTGSEPSSPNLYSPGTGLSMKRSLQRFLQKRKNRIQEASPYHH 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3341g00057 128 Pfam tify domain 46 75 IPR010399 -
Gabi3341g00057 128 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 126 IPR040390 -
Gabi3341g00057 128 SMART tify_2 43 77 IPR010399 -
Gabi3341g00057 128 MobiDBLite consensus disorder prediction 80 107 - -
Gabi3341g00057 128 MobiDBLite consensus disorder prediction 12 48 - -
Gabi3341g00057 128 ProSiteProfiles Tify domain profile. 43 77 IPR010399 -
Gabi3341g00057 128 Pfam Jas motif 106 126 IPR018467 -
Gabi3341g00057 128 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3341g00057 Gabi-Chr3341 500187 502362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3341g00057 1 127 Tify Gene Family AT1G30135 43.382 7.91e-25 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gabi3341g00057 tify 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3341g00057 - - gmx:100305565 180.644