Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3341g00047 ATGGAGGAGGATGAGATTCAAGCACAGGCGTGTAAATTCCCAAGAGTTGGAAATGAGTCTAACAAGATAGGTCCTAGAGGAGGGAGTGAGCAATACCCAGATCATCATGAGGGAGAAGATGGAGACCTCAGAAGAAGAGGTGGAGGAGGAGGAGGAGGAGGAGGCATTGATGGCTGCACAAACAGGTTCAATAGTTGGCACCACTCTTCAAGAATCATAAGGGTGTCTCGAGCATCTGGTGGGAAAGATAGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACCGACGGGTTAGACTCTCTGTGACCACAGCTATTCAGTTCTATGATCTTCAAGATCGCTTGGGTTATGACCAACCCAGTAAAGCTGTGGAGTGGCTAATCAAATCAGCTGCAGATGCCATTTCAGAGCTACCTTCCTTGAACAACACATTCCCTGATACCCCAAAGCAACCGAGCGATGAGAAAAGAGCAAGTGTGGGAACCGAACAAGGCTTTGATTCAGCTGATGCAGAGTTAGATGGTGAAACCAACTATCATCAGAACCAAAGCCAGAACCTTTCTTTGTCCAAATCTGCTTGTAGCAGCACTTCAGAGACAAGCAAAGGCTCTGGCTTGTCCCTCGCCAGGTCTGACATTCGTGTGAACCGTGTCAAGGCACGAGAGAGGGCAAGGGAAAGAGCAGCCAAGGAAAAAGAGAAGGAGAAGGAGAATGAATCTCATCACATTGCTCATCACCACCATAACCATAACCATAACCATAACCACAATGTGAACCCCATTTCTCAAACAGCTTCTTTCACTGAGCTACTCACAGGTGGGATCAGCAATGCAGTTCCCACCACAAGCAGTCCTAGAGGATCAATTCATCAGAATAATCATGGTGGTGGTGGTGGTACTGATGAGCCTAATCTGTTCAACAAAGCAGCTAGACAGCAATGGTGTTCAGCACCAATGGACTATTTTACCTCAGGGCTTCTGGGGCCTTCCTCTTCAAGAACACATCAACATCATAATCATCAATCATCATCTTCTTCTTCTGGGTTCTCAGTATCACAAATCCAATTGGGACATTCCCTTCCTGATGCAATGTCAGTTTCACCATTCAATGTAAGTGGTGAAAACCACTCATCAGATCAGCTGCAGCATTTCTCATTCATTCCAGATCATCTCATGCCAGCTGTGGTTACTTCTTCTCAGCCCAGCGGGAACGATTACAATCTCAACTTCACAATCTCAACTTCGGGCCTTGCTGGTTACAATAGGGGGACCCTTCAGTCCAATTCACCGTCTCTTTTGCCTCATCATCACCTGCAGAGGTTTTCACCTATAGACGGATCCACTGTACCTTTCTTCATTGGTGGAGGAGCTGCTGCTCCATCTTCTGCTGCTCCTACCATGGAGAATCATCACCAACATCAGTTTTCATCTGTTTTTGATGGTAGTCGCTTGCAGCTCTGCTATGGCGACGGATGCCGACATTCAGATCAGAAAGGGAAAGCCAAGAACTGA 1515 0.468 MEEDEIQAQACKFPRVGNESNKIGPRGGSEQYPDHHEGEDGDLRRRGGGGGGGGGIDGCTNRFNSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAISELPSLNNTFPDTPKQPSDEKRASVGTEQGFDSADAELDGETNYHQNQSQNLSLSKSACSSTSETSKGSGLSLARSDIRVNRVKARERARERAAKEKEKEKENESHHIAHHHHNHNHNHNHNVNPISQTASFTELLTGGISNAVPTTSSPRGSIHQNNHGGGGGTDEPNLFNKAARQQWCSAPMDYFTSGLLGPSSSRTHQHHNHQSSSSSSGFSVSQIQLGHSLPDAMSVSPFNVSGENHSSDQLQHFSFIPDHLMPAVVTSSQPSGNDYNLNFTISTSGLAGYNRGTLQSNSPSLLPHHHLQRFSPIDGSTVPFFIGGGAAAPSSAAPTMENHHQHQFSSVFDGSRLQLCYGDGCRHSDQKGKAKN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 179 208 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 327 353 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 1 59 - -
Gabi3341g00047 504 ProSiteProfiles TCP domain profile. 81 139 IPR017887 -
Gabi3341g00047 504 ProSiteProfiles R domain profile. 215 233 IPR017888 -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 215 245 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 140 163 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 277 306 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 277 299 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 179 261 - -
Gabi3341g00047 504 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 55 417 IPR005333 GO:0003700
Gabi3341g00047 504 Coils Coil 219 240 - -
Gabi3341g00047 504 MobiDBLite consensus disorder prediction 29 46 - -
Gabi3341g00047 504 Pfam TCP family transcription factor 80 235 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3341g00047 Gabi-Chr3341 429012 438646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3341g00047 59 504 TCP Transcription Factor Family AT4G18390 42.316 1.08e-78 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gabi3341g00047 TCP 7.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3341g00047 - - jre:109011061 516.538