Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3338g00043 ATGACAAGGAAGCTAAAGGTTTATGTAGATCGTATGTCCCAGCCATCTCGAGCAGTTCTTATCTTTTGCAGGTTTAACGGAATCGACTTCGAGGAGATTAAAGTAGACATTTCCAAACGTCAGCAACTGTCTCCTGAATTCAGAGAAGTAAACCCTCTGCAGAAAGTTCCAGCTATTGTTCATGGAAGCTTCAATCTCTCCGAGAGCCATGCAATCCTTGTCTATCTTGCTTCTGCTTTTCCTGGCATTGCCGACCACTGGTATCCAACTGATCTTTTCAGGAGATCCAAAATTAACTCAGTAATGGATTGGCATCACTCTAATTTACGACATGGAGCAATGGGCTATGTAGTAAATACTGTACTAGGGCCTGCACTTGGCCTTCCATTGAATCATAAAGCAGCTGCTGAAGCAGAGAAAGTTTTGTTATCTTCTTTATCAAAACTGGAAAATATTTGGCTAAATGGAGATGCACGCTTCCTGCTTGGTGGCTCTCAACCGTCTATAGCAGATCTCAGCCTGGTTTGTGAACTCATGCAACTTGAGATTTTGGATGAGAAGGATCGCAATCGTATTTTATCCCCATACAAGAAAGTTCTCCGTTGGATTGAGGATACAAGAACTGCAACAAATCCTCACTTTGAAGAAATGCATAATATCCTTTATAGAGCTAAAAAGAAATTCCAACAGCAGCGTTCAAGGGTGGCTGAAACTGGGACTGAGCCTAGCAACAAGATGGGGGGCCATTCAAAGATGTGA 759 0.4242 MTRKLKVYVDRMSQPSRAVLIFCRFNGIDFEEIKVDISKRQQLSPEFREVNPLQKVPAIVHGSFNLSESHAILVYLASAFPGIADHWYPTDLFRRSKINSVMDWHHSNLRHGAMGYVVNTVLGPALGLPLNHKAAAEAEKVLLSSLSKLENIWLNGDARFLLGGSQPSIADLSLVCELMQLEILDEKDRNRILSPYKKVLRWIEDTRTATNPHFEEMHNILYRAKKKFQQQRSRVAETGTEPSNKMGGHSKM 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3338g00043 252 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 4 245 IPR043377 -
Gabi3338g00043 252 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
Gabi3338g00043 252 CDD GST_N_Theta 5 80 IPR040075 -
Gabi3338g00043 252 Gene3D Glutaredoxin 4 83 - -
Gabi3338g00043 252 FunFam Glutathione S-transferase theta-1 85 233 - -
Gabi3338g00043 252 SFLD Main.4: Theta-like 4 232 - -
Gabi3338g00043 252 MobiDBLite consensus disorder prediction 233 252 - -
Gabi3338g00043 252 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Gabi3338g00043 252 SUPERFAMILY Thioredoxin-like 4 89 IPR036249 -
Gabi3338g00043 252 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Gabi3338g00043 252 SUPERFAMILY GST C-terminal domain-like 85 208 IPR036282 -
Gabi3338g00043 252 Pfam Glutathione S-transferase, C-terminal domain 135 204 - -
Gabi3338g00043 252 MobiDBLite consensus disorder prediction 231 252 - -
Gabi3338g00043 252 SFLD Glutathione Transferase (cytosolic) 4 232 IPR040079 -
Gabi3338g00043 252 Gene3D - 84 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3338g00043 Gabi-Chr3338 428728 432213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3338g00043 4 240 Glutathione S-transferase Gene Family AT5G41210 67.511 9.10e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3338g00043 K00799 - gmx:100799229 447.203