Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3338g00035 ATGGTGGCCTCAAATGAAGTTGGGGCACTTATAACTTTCAAAGAAGCTGTATATGAAGATCCACATCTGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCCTTGTGACTGGAATGGCGTTTCATGCACTGCGGCTGGAGATCATGTCATCAAGCTAAACATATCGGGGTCACTATTAAGGGGGTTTCTTGCTCCAGAATTTGGGCAAATCACCTACTTGCAAGAACTGATCTTGCATGGAAACAATCTCATTGGAATAATACCGAAAGAATTGGGCATGTTAAAATCTCTTACGGTGTTGGATTTGGGAATGAATCAGTTATCAGGACCAATTCCTCCAGAAATTGGGAATTTGACCCAAGTTGTAAAAATAAACTTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAACTAGGAAATTTGAAGTACCTTCAAGAACTTCGGCTTGATAGAAATAAGCTTCAAGGACCTGTTCCTGCTGGTGGTAGTTCAAATTTTTCTTCGAATATGCATGGGATGTATGCCTCAAATATGAACTTAATTGGCTTCTGTCGTTCATCCCAGTTAAAAGTTGCTGATTTTTCATATAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGACTATCTTCCAAGATCAAGCTTTCAAGGGAATTGCCTCCAGATCAAAGACATAAAACAGCGCACTTCTGTGCAATGTGCTGGTGCTTCACCTGCCCAGAGCCATCCATCAGTGAACCCAAAGTACCAATCTGCTGCTGATCATGTGTCCAAGCATCATGGAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTAACGGGAACCATGGTTGGTTCTCTCTTTTTGATTGCTATTCTCACTGCTTTCCAGAGGTTTAACAACAGATCATCTATCATTATTCCTTGGAAAAAATCTGCAAGCGAGAAAGATCATATGACAGTATATATAGACTCTGAGATGCTGAAGGACGTGACTAGATATAACAGACAAGAGCTTGAAGTGGCATGTGAAGACTTCAGCAACATAATTGGGTCTTCACCAGATAGTGTGGTCTATAAGGGTACCATGAAAGGTGGGCCTGAGATTGCTGTAATTTCCCTCTGCATCAAGGAAGAGCATTGGACAGGATACCTGGAGCTCTATTTTCAGAGAGAGGTAGCAGAATTGGCAAGGTTAATTCATGATAATACTGGAAAACTACTAGGCTATTGTAGAGAGGACACTCCATTTACAAGGATGCTCGTTTTTGAGTATGCATCAAATGGGACACTTTATGACCACCTACATTGTTATGGAGAAGGGTGCCAGCTGTCTTGGACACGGCGCATGAAAATTATTTTAGGCATTGCACGTGGACTCAAGTATTTGCACACCGAAGTTGAGCCGCCATTCACTATCTCAGAGTTGAATTCCAATGCCGTATACCTCACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTATTGAAAGATCAGAAAAAAATTCTGGTTCTGTTAGCAGCCAAGGTTCTGTTTGTGTTCTTCCAAACTCCCTTGAGGCACGCCATCTTGATACCAAAGGAAACGTTTATGCTTTTGCAGTACTTCTACTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGAGAAAGGGTACTTGGTGGATTGGGCCATGGACTATCTTGAAATGCCAGAAGTAATGTCATATTTGGTGGATCCTGAGTTGAAACATTTTAGATATGATGACCTCAAAGTAATATGTGAGGTAATAACACTTTGTATCAGTCCTGATCCCACTGTGCGTCCATCAATGCGAGAATTATGCAGCATGCTTGAGAGCAGAATTGACACATCAATAAGCGTGGAGCTCAAGGCATCATCTCTGGCTTGGGCTGAGCTAGCACTTTCATCATAA 1923 0.4181 MVASNEVGALITFKEAVYEDPHLVLSNWNTLDSDPCDWNGVSCTAAGDHVIKLNISGSLLRGFLAPEFGQITYLQELILHGNNLIGIIPKELGMLKSLTVLDLGMNQLSGPIPPEIGNLTQVVKINLQSNGLTGRLPPELGNLKYLQELRLDRNKLQGPVPAGGSSNFSSNMHGMYASNMNLIGFCRSSQLKVADFSYNFFVGSIPKCLDYLPRSSFQGNCLQIKDIKQRTSVQCAGASPAQSHPSVNPKYQSAADHVSKHHGASKPAWLLALEIVTGTMVGSLFLIAILTAFQRFNNRSSIIIPWKKSASEKDHMTVYIDSEMLKDVTRYNRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLIHDNTGKLLGYCREDTPFTRMLVFEYASNGTLYDHLHCYGEGCQLSWTRRMKIILGIARGLKYLHTEVEPPFTISELNSNAVYLTEDFSPKLVDFESWKTIIERSEKNSGSVSSQGSVCVLPNSLEARHLDTKGNVYAFAVLLLEIISGRPPYCKEKGYLVDWAMDYLEMPEVMSYLVDPELKHFRYDDLKVICEVITLCISPDPTVRPSMRELCSMLESRIDTSISVELKASSLAWAELALSS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3338g00035 640 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 3 166 - -
Gabi3338g00035 640 Gene3D Transferase(Phosphotransferase) domain 1 423 629 - -
Gabi3338g00035 640 Pfam Protein tyrosine and serine/threonine kinase 345 614 IPR001245 GO:0004672|GO:0006468
Gabi3338g00035 640 Pfam Leucine rich repeat N-terminal domain 4 43 IPR013210 -
Gabi3338g00035 640 Gene3D Ribonuclease Inhibitor 3 239 IPR032675 -
Gabi3338g00035 640 FunFam Inactive receptor-like serine/threonine-protein kinase 315 422 - -
Gabi3338g00035 640 SUPERFAMILY Protein kinase-like (PK-like) 317 615 IPR011009 -
Gabi3338g00035 640 ProSiteProfiles Protein kinase domain profile. 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3338g00035 640 Gene3D Phosphorylase Kinase; domain 1 314 422 - -
Gabi3338g00035 640 PANTHER PROTEIN MALE DISCOVERER 2 4 638 - -
Gabi3338g00035 640 SUPERFAMILY L domain-like 9 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3338g00035 Gabi-Chr3338 397444 401820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3338g00035 4 615 Receptor kinase-like Gene Family AT2G01210 27.581 7.51e-54 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gabi3338g00035 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3338g00035 - - gmx:100779744 1098.57