Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3338g00022 ATGGATCCCTATGTGATCCTTATATGCCGCACTCAGGAGCAACAAAGCAGTGTTGCATCAGGTCATGGAAGTGAACCGGAGTGGAATGAGAATTTTGTATTCAATGTGTCTGAAGGTGTTAACGAACTCAGATTGAAGATCATGGACAGTGATACCGGAACGGCACATGATTTCGTAGGAGAAGCTACGATTCCATTGGATGCGTTGTTTACTGAAGGAAGCATCCCACCCGTGGCATACAATGTTGTCAAGGATGGCCACTACTGTGGAGAGATTAGAGTTGGCCTTACTTTCACACACGAGGATCGCAGAGAACGGTCAGAGGAAAGTTTTGGTGGATGGAAGGAGTCTGGTTACTGA 360 0.4639 MDPYVILICRTQEQQSSVASGHGSEPEWNENFVFNVSEGVNELRLKIMDSDTGTAHDFVGEATIPLDALFTEGSIPPVAYNVVKDGHYCGEIRVGLTFTHEDRRERSEESFGGWKESGY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3338g00022 119 ProSiteProfiles C2 domain profile. 1 79 IPR000008 -
Gabi3338g00022 119 PANTHER C2 DOMAIN-CONTAINING 1 102 - -
Gabi3338g00022 119 SMART C2_3c 2 78 IPR000008 -
Gabi3338g00022 119 Pfam C2 domain 1 72 IPR000008 -
Gabi3338g00022 119 Gene3D C2 domain 1 100 IPR035892 -
Gabi3338g00022 119 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 101 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3338g00022 Gabi-Chr3338 258594 265521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3338g00022 2 73 C2H2 Transcription Factor Family AT4G21160 36.111 1.29e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3338g00022 - - gmx:100782974 214.927