Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3338g00011 ATGGAGAACCATCAATTGTCATTCCCTGTCTCATCTTCATCATCCGTTTCTCTACCTGATTTAAAAGTTGCTCATAGCTCTAATATTCATGTTAAAAAGGCAGATGATCTTTCAAAAACTCAAAGGAAAAAGATATCAAGCCAGAAAGGTGGCAAAGAGATCAAGCAGCACAGATATGTATTTCAAACAAGGAGTCTGATTGATATTCTAGACGATGGGTACCGATGGAGAAAGTATGGGGAAAAGGCAATGAAAAACAATAAATTTCGTAGAAGTTACTACAGATGTTCTTATCGAGGCTGCAATGTCAAGAAACAAATCCAACGCCATTCCATAGATGAACAGATCGTGGTAACAACCTATGAAGGGATGCATATCCACCCTGTCGAGAAGACAGCTGAAAGCTTCGAGCAGATCTTGAGAAACTTAAAGATATACAGCCAACTGTATAACGTATCTCCAACGTTAGAATAA 474 0.384 MENHQLSFPVSSSSSVSLPDLKVAHSSNIHVKKADDLSKTQRKKISSQKGGKEIKQHRYVFQTRSLIDILDDGYRWRKYGEKAMKNNKFRRSYYRCSYRGCNVKKQIQRHSIDEQIVVTTYEGMHIHPVEKTAESFEQILRNLKIYSQLYNVSPTLE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3338g00011 157 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3338g00011 157 SUPERFAMILY WRKY DNA-binding domain 63 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3338g00011 157 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 31 132 IPR044810 GO:0003700
Gabi3338g00011 157 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3338g00011 157 Gene3D WRKY domain 53 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi3338g00011 157 Pfam WRKY DNA -binding domain 71 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi3338g00011 157 FunFam WRKY transcription factor 57 56 130 - -
Gabi3338g00011 157 MobiDBLite consensus disorder prediction 32 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3338g00011 Gabi-Chr3338 138606 139495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3338g00011 58 149 WRKY Transcription Factor Family AT5G13080 69.565 1.88e-48 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi3338g00011 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3338g00011 - - gmx:100127378 209.534