Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3338g00002 ATGGCAAATAAACTTTATATAAGGAAAGGAGAACCAACCGTAGTTCTACCTGCAGAAGAAACAAAAAAGGGCTTCTACTATCTTTCAAACCTTGACCAGAATATAGCCCTTCCAGTTCGAACAGTTTACTGTTATAAGTCAGCCTCTAGAGGCAATGAGGATGCTGCGCAAGTCATCAAGGAATCCTTGTCAAAGATTCTTGTTCACTATTACCCTATGGCTGGCAGGTTGAAAATCAGCTCAGAAGGGAAGCTGATAGTAGACTGCACAGAAGAGGGTGTTGTATTTGTTGAGGCTGAAGCAAGCTGTGTGATTGAGGACTTGGGAGATATGAAAAAGCCTGACCTTGAAACTCTTACAAAACTGGTTTATGATATCCCTGGTGCAACCAACATACTTGAAATACCTCCTCTGCTAATTCAGGTGACAAAGTTCAAATGTGGAGGATTTGTTTTGGGGGTAAACGTGAACCATTGCATGAATGATGGTTTAAGTGCAATGCAATTTGTGAACTCATGGGGTGAGACAGCCAGAGGCATAGACTTAAAAATTCCACCATTTCTGGACCGAACCATACTCAAAGCGCGCAACTCTCCTAAAATAGAGTTCCCACACAATGAGTTTACTGAAATTGAAGATGTATCAGATACCAGCAAACTTTATGAGGAAGAGATGCTCTACAGGTCCTTCTGTTTCGATCCTGATAAGCTTGAGCTGCTGAAGAAAAAAGCCACAGAAGATGGTGTTTTGAAGAAGTGCTCCACTTTTGAAGCACTCTCAGCTTTTGTGTGGAGATCTAGAACTGAAGCCTTAAGTATGCATCCTGATCAACAAACGAAGCTACTTTTTGCTGTTGATGGAAGGTCTAAATTTGTGCCACCAATACCAAAGGGGTTCTTTGGCAATGCTATTGTGTTGTCAAATGCAATGTGCAATGCATGTGAGTTATTGAAGAAACCACTTTCATTTACAGTGGGATTGATAAGCAAAGCAATAGATATGGTCACAGACAGTTACATGAGATCTGCTATTGATTATTTTGAAGTCAAAAGAACGAGGCCTTCACTAACGGCAACCCTTTTGATCACAACATGGACAGGGTTATCTTTCCACACTACAGATTTTGGATGGGGGAAGCCTCAGTCTTTTGGTCCTGCGACTTTGCCAGAAAAGGAAGTCATTTTGTTCTTATCACATAGTGAAGAAAGGAAAAGCATAACTGTGCTCCTGGGTTTGCCTGCCTCTGCCATGAAAAAGTTTGAAGCATTGATGGAGATATGA 1281 0.413 MANKLYIRKGEPTVVLPAEETKKGFYYLSNLDQNIALPVRTVYCYKSASRGNEDAAQVIKESLSKILVHYYPMAGRLKISSEGKLIVDCTEEGVVFVEAEASCVIEDLGDMKKPDLETLTKLVYDIPGATNILEIPPLLIQVTKFKCGGFVLGVNVNHCMNDGLSAMQFVNSWGETARGIDLKIPPFLDRTILKARNSPKIEFPHNEFTEIEDVSDTSKLYEEEMLYRSFCFDPDKLELLKKKATEDGVLKKCSTFEALSAFVWRSRTEALSMHPDQQTKLLFAVDGRSKFVPPIPKGFFGNAIVLSNAMCNACELLKKPLSFTVGLISKAIDMVTDSYMRSAIDYFEVKRTRPSLTATLLITTWTGLSFHTTDFGWGKPQSFGPATLPEKEVILFLSHSEERKSITVLLGLPASAMKKFEALMEI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3338g00002 426 FunFam Tryptamine hydroxycinnamoyl transferase 212 425 - -
Gabi3338g00002 426 Gene3D - 7 209 IPR023213 -
Gabi3338g00002 426 Pfam Transferase family 11 425 - -
Gabi3338g00002 426 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 422 - -
Gabi3338g00002 426 FunFam Spermidine hydroxycinnamoyl transferase 5 208 - -
Gabi3338g00002 426 Gene3D - 210 425 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3338g00002 Gabi-Chr3338 39837 41744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3338g00002 4 424 Monolignol Biosynthesis Gene Families AT5G48930 38.761 8.98e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3338g00002 K15400 - gmx:100527026 682.174