Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3338g00001 ATGGACTTTGTGATGAAGAAGTGTAAGAGGGTATGCAGAAGCAGCAAGAGATTGCATGCTGAAGAAGCAGACAGTGGCAAATATGGAAAATTATCAGAGAAGCACATACAAAAGAATAAGAAGAATAAGCCTCAAGTGGCTCCGCAGGGTTGTCTTTTTGTCTACGTTGGACATGAGAGACAAAGATTCGTAATAAAGATCAAGCTCACAAACCACCCTTTGTTCAAGACTCTTTTGGATGCTGCTGAGAATGAATATGGTTATAGAAACGATGGTCCCCTATGGTTACCTTGCAATGTTGATTTTTTCTGTGAGGCATTGGCAGAGATGGAGAGCACTGAGGATGATACGGGTTTTGTTGGTTGCAACTTTCCAATGGGTCACAAGCAGAGCTCCTCAGTTTTCCACAGTCCAATGTCTTATCGTTCTAACCTGAGTTTTGCTGCCGATTATGAGCTTTTGGTATGTAAGTAA 474 0.4177 MDFVMKKCKRVCRSSKRLHAEEADSGKYGKLSEKHIQKNKKNKPQVAPQGCLFVYVGHERQRFVIKIKLTNHPLFKTLLDAAENEYGYRNDGPLWLPCNVDFFCEALAEMESTEDDTGFVGCNFPMGHKQSSSVFHSPMSYRSNLSFAADYELLVCK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3338g00001 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 105 IPR003676 GO:0009733
Gabi3338g00001 157 Pfam Auxin responsive protein 7 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3338g00001 Gabi-Chr3338 32005 32478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3338g00001 35 125 Calmodulin-binding Proteins AT4G34750 36.264 1.87e-15 67.4