Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3335g00033 ATGCTTGAACAGGAGTGTCTCCTTAGATCACCATTGTTGCTTTGTTTTTTTATTAGCTTCTTGTTACATCCTGTTGTGACAGCTGTGATACCTTTGGGTTCCAAACTTTCTGTGGTTGACAATAACTGTTGGGTTTCCTCCAATGGTGATTTTGCATTTGGGTTCTTTAACATTTCTAATGAACCAAACCAGTTCAGTGCTGGCATTCGTTTCAATTCAAAGTCTATGCTATATAGCCAACAAACAGTAGTGTGGGTTGCTGGAGCTCATGTCACAGTAGGTAACAGGTCCTATTTCCAACTCACTCCTGAAGGGGAACTGGTACTGTTTGATTCCTTGCAAGGAGTCACGCTATGGACCAGTGCAACAGGCAACAGAGCTGTTGTTTCAGCAGCTCTTCATGATGATGGCAATCTTGTTCTTATAGACAGAGAGAAAAACATCATTTGGCAAAGTTTTGATACTCCATCTGATACACTTCTCCCGGGACAGAGTTTATCTGTTTATCAAATACTTAGGGCTGCTACTAAGAATCCTGTGTCCAGTTACTACAGTCTTTACATGAATGCTTCTGGTCATTTGCAGCTTAGGTGGGAGAGTAATATTATATACTGGACAAGTGAAAGCCCTTCTTCTGCTTCAAATCTCACTGCATTTCTTACAACTGATGGAGCTCTACAACTTAGAGACCTGAGTTTGAAAGCTGTTTGGAGTGTGTTTGGAGAAGACCACAATGATTCTGTGAAGTACCGGTTTCTTAGGCTAGATGCTGATGGCAATCTCCGCTTATATTCATGGGTTGAAACATCACAATCATGGAGATCAGTGTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTCAACGTGGTATGTGTGTCTTCACTGCTTCAGGTTCTGCTGATTGTGTGTGCCCTTTTGAGGTAACAGAGAATAAGGAATGTTTGGTTCCATATGAACATGAGTGTGAATCTGGCTCCAGTATGCTATCATATAAGAACACATATCTATATGGAATTTACCCTCCTGATGATTCAGTTATCATGAGTAGTTTGCAGCAATGTGAACAATTGTGCTTGAATGACTCACAGTGTACGGTTGCAACCTTTACAAACAATGGTAGTCCACAATGCTCGATAAAGAAAACAAAGTATGTTACTGGCTATGCGGATCCATCTCTTAGCTCAGTATCATTTGTTAAGAGGTGCTCAGGTCCATTTGCTGTGAATCCTAGTCTCACAAATTCACCCCCACCAAAACTGATTCCTAGGCTTTGTGTTCCTTGTATAATGGGAGCAGCCTCTGGAACATTTTTCATCCTTGCGATCTTCCAGCTCGGAATAGTTTTCTGCATCTGTAGAAGAAAAAACTCTACTATGAGACAAGTCACTTTAGCCTTCACATGCCCAAATTCGAAGGGCATACTTGTGTTATCCTTTTCAGAAATCAAGAGCCTCACTGGAGATCTCAAGGATCCAATTGGGCCAAATATGTTCAAGGGTGTGCTACCGAACGATCGCTCGATTGCAGTTAAAGACCTGAAAGCATCCATAGAAGAAAGGAAGTTCCGGAGTGCTGTTCTGAAGATAGGGAGCATCCACCACAAGAACCTTGTGAAGCTGGAGGGTTATTGTTGTGAGTTTAATCATAGATTTTTGGTGTATGAATATGCCAAAAATGGTTCACTTGATAAGTATATAGATGATTGTACTCTTTGCAAGAGGCTAACTTGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAGGCCATCTGTTATTTGCATTCAGGGTGTAGGGAGTTTGTAAGCCATGGAAATTTGAAATGTGAGAATGTCATGTTGGATGAAAATTTAGTGGCCAAGGTATCTGAATATGGGTTTGCAATAGTAAATGGTGAGGCCACATATTGTGGCTTTTCAGCTGAGAAGGATGTAGGAGATTTTGGCAAGTTAGTATTAACCTTGTTGAGTGGCTGTAGAGATCAAGAACAACTTTGTGAGTGGGCATATAAAGAACGGATGGAAGGGAGTGCAGCTAATGTGGTTGACAAAAGAATTGACGGTGGTGTTGATTCAGAGGAACTAGAGTGTGCATTAAGAATTGCATTCTGGTGCCTTCAAATGGATGAACGTAGAAGACCTTCTATGGAGGAGGTAGTGAGAGTACTAGATGGTACATTGAACGTTGATCCCCCACCACCTCCATTTGCCTTACAGATGCCGTTACAGGAAGATGATCCACAAGAACATGGTTCAGAATCAGTGCTTCAGTAG 2286 0.4164 MLEQECLLRSPLLLCFFISFLLHPVVTAVIPLGSKLSVVDNNCWVSSNGDFAFGFFNISNEPNQFSAGIRFNSKSMLYSQQTVVWVAGAHVTVGNRSYFQLTPEGELVLFDSLQGVTLWTSATGNRAVVSAALHDDGNLVLIDREKNIIWQSFDTPSDTLLPGQSLSVYQILRAATKNPVSSYYSLYMNASGHLQLRWESNIIYWTSESPSSASNLTAFLTTDGALQLRDLSLKAVWSVFGEDHNDSVKYRFLRLDADGNLRLYSWVETSQSWRSVWQAVENQCKVFATCGQRGMCVFTASGSADCVCPFEVTENKECLVPYEHECESGSSMLSYKNTYLYGIYPPDDSVIMSSLQQCEQLCLNDSQCTVATFTNNGSPQCSIKKTKYVTGYADPSLSSVSFVKRCSGPFAVNPSLTNSPPPKLIPRLCVPCIMGAASGTFFILAIFQLGIVFCICRRKNSTMRQVTLAFTCPNSKGILVLSFSEIKSLTGDLKDPIGPNMFKGVLPNDRSIAVKDLKASIEERKFRSAVLKIGSIHHKNLVKLEGYCCEFNHRFLVYEYAKNGSLDKYIDDCTLCKRLTWRKRVEICSSVAKAICYLHSGCREFVSHGNLKCENVMLDENLVAKVSEYGFAIVNGEATYCGFSAEKDVGDFGKLVLTLLSGCRDQEQLCEWAYKERMEGSAANVVDKRIDGGVDSEELECALRIAFWCLQMDERRRPSMEEVVRVLDGTLNVDPPPPPFALQMPLQEDDPQEHGSESVLQ 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3335g00033 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 275 IPR036426 -
Gabi3335g00033 761 MobiDBLite consensus disorder prediction 734 761 - -
Gabi3335g00033 761 Pfam D-mannose binding lectin 82 168 IPR001480 -
Gabi3335g00033 761 SMART blect_4 35 156 IPR001480 -
Gabi3335g00033 761 Gene3D Phosphorylase Kinase; domain 1 456 560 - -
Gabi3335g00033 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561 639 - -
Gabi3335g00033 761 PIRSF SRK 3 760 IPR024171 GO:0004674
Gabi3335g00033 761 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Gabi3335g00033 761 Pfam Protein tyrosine and serine/threonine kinase 508 634 IPR001245 GO:0004672|GO:0006468
Gabi3335g00033 761 Gene3D - 27 155 IPR036426 -
Gabi3335g00033 761 CDD B_lectin 45 156 IPR001480 -
Gabi3335g00033 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 457 560 - -
Gabi3335g00033 761 Gene3D - 156 275 IPR036426 -
Gabi3335g00033 761 Gene3D Hepatocyte Growth Factor 334 407 - -
Gabi3335g00033 761 ProSiteProfiles Protein kinase domain profile. 483 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3335g00033 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 640 735 - -
Gabi3335g00033 761 Gene3D Transferase(Phosphotransferase) domain 1 561 638 - -
Gabi3335g00033 761 Gene3D Transferase(Phosphotransferase) domain 1 639 734 - -
Gabi3335g00033 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 155 - -
Gabi3335g00033 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 156 275 - -
Gabi3335g00033 761 ProSiteProfiles Bulb-type lectin domain profile. 157 276 IPR001480 -
Gabi3335g00033 761 Pfam S-locus glycoprotein domain 245 310 IPR000858 GO:0048544
Gabi3335g00033 761 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Gabi3335g00033 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 159 IPR036426 -
Gabi3335g00033 761 PANTHER OS07G0415500 PROTEIN 12 741 - -
Gabi3335g00033 761 SMART ntp_6 327 405 IPR003609 -
Gabi3335g00033 761 SUPERFAMILY Protein kinase-like (PK-like) 502 727 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3335g00033 Gabi-Chr3335 409514 411799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3335g00033 414 734 Receptor kinase-like Gene Family AT1G56120 32.778 1.50e-35 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gabi3335g00033 PK_Tyr_Ser-Thr 1.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3335g00033 - - gmx:100809478 1298.88