Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3335g00015 ATGGCGCAGAAGAAGAAGAAAGCTAGGGTTCCCGAAGATGAAGAAGGAATCGAAGCTGAACCTCAAAAGAACCTCTACCAGGTTCTTGGCGTGGAAAGAACTGCATCTCAACAGGAAATAAAGAAGGCGTACTACAAGTTGGCATTGCAGCTACATCCTGATAAGAATCCTGGTGATGAGGAAGCTAAAGAGAAATTTCAGCAACTGCAAAAAGTTATCTCAATTCTTGGGGATGAAGAGAAACGGGCCCTGTATGATCAGACTGGTTGTGTTGAGGATGCTGATCTTGCTGGAGATGTTGTTCGGAATCTTCATGAGTTTTTCAGAACAATGTACAAGAAGGTCTCTGAAGTTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCGGAGAAAAATGATTTGATTGATCAATACAAGAAGTGTAAGGGTAATATGAACAGGCTTTTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCGCACCGATTCAAGGATATTCTTGATGAGGCTATAGCAGCCGGAGAACTAAAGACAACAAAAGCCTACCAGAAATGGGCTAAGGAAGTATCTGAAACCAAACCTCCAACAAGTCCTTTAAGGAGGAGGGCAAAGTCAAATAATCAGTCGAAAACAGACCTGTATGCAATCATTACACAACGCCTAAATGACAGGAAAGACCAGTTTGATTCAATGTTCTCGTCTCTTGTTTCAAAATATGGTGGAGGTGATATGCCAGAACCCTCTGAGGAGGAATTCGAAGCTGCACAGAGAAAGCTGGAGAGTGGAAGATCCTCAAAAAAATCAAAGCAATCAAAGCGGAAGTAA 837 0.4182 MAQKKKKARVPEDEEGIEAEPQKNLYQVLGVERTASQQEIKKAYYKLALQLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVEDADLAGDVVRNLHEFFRTMYKKVSEVDIEEFEANYRGSDSEKNDLIDQYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAIAAGELKTTKAYQKWAKEVSETKPPTSPLRRRAKSNNQSKTDLYAIITQRLNDRKDQFDSMFSSLVSKYGGGDMPEPSEEEFEAAQRKLESGRSSKKSKQSKRK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3335g00015 278 ProSiteProfiles dnaJ domain profile. 24 89 IPR001623 -
Gabi3335g00015 278 MobiDBLite consensus disorder prediction 254 270 - -
Gabi3335g00015 278 MobiDBLite consensus disorder prediction 190 215 - -
Gabi3335g00015 278 CDD DnaJ 24 78 IPR001623 -
Gabi3335g00015 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 16 274 IPR042977 -
Gabi3335g00015 278 SUPERFAMILY Chaperone J-domain 21 95 IPR036869 -
Gabi3335g00015 278 Coils Coil 120 140 - -
Gabi3335g00015 278 Gene3D DnaJ domain 11 99 IPR036869 -
Gabi3335g00015 278 SMART dnaj_3 23 81 IPR001623 -
Gabi3335g00015 278 MobiDBLite consensus disorder prediction 240 278 - -
Gabi3335g00015 278 PRINTS DnaJ domain signature 81 100 IPR001623 -
Gabi3335g00015 278 PRINTS DnaJ domain signature 44 59 IPR001623 -
Gabi3335g00015 278 PRINTS DnaJ domain signature 26 44 IPR001623 -
Gabi3335g00015 278 PRINTS DnaJ domain signature 61 81 IPR001623 -
Gabi3335g00015 278 Pfam DnaJ domain 24 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3335g00015 Gabi-Chr3335 208351 210740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3335g00015 26 86 C2H2 Transcription Factor Family AT1G74250 40.909 1.26e-08 53.9