Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3335g00001 ATGGCTGCTGCTAGTGTTATGTTTTACATCTTCTTCTCCTCCTTAGCTTTGGTTGTTTTCACTTTACTTGTCAAGTCCCTTAGCAAACGAACCACAAATTGCAGCACCAAACTTCGATCCCCACCAAGCCCACCATCACTACCCATCATTGGCCACCTTCATCTTATAGGCTCAGTCATACCAAAATCATTCCAAACTCTAGCTCGCTCCTATGGCGCCCCTCTCATGCAACTCCAGCTAGGTGCCTCAACATGCATAGTTGTTTCCAATGCCCAAGTTGCAAAAGAAGTCATGAAAAACCATGACCTCAATTTCTGCAACCGACCCTTATTTGGATCCTCCGAACACTTCCTATATAAAGGGTCTTATTTCATCGTTGCCCCATATGGCCCTTATTGGCGGTTCGTGAAGAAGCTATGTGTGACTCAATTACTCTCAAGCTCGCAACTTGGCCGCTTCATTCACATCCGAGAGCAAGAGAGAAAGAAGCTTTTGAAATCTCTGTTCTTGTGTTCCACTGAAGCCAGAGCCTTGGATTTGTGTTTCGAGCTCACTTGTTTGACCAACAATATCCTATGTAGGATGGCTATGAGCACTACTTGCTTGGACAAAGCTAATGATGCTGAACAGATTCATGTCTTGGTTCGGGATTTTTTGCACGTTGGAGCTAAATTGAGCATGGGTGAGGTATTTGGAGTTTTGGGAAAGTTTGACTTATTTGGGTATGGGAAAAAGCTTTCCAAAATAGTAGGAAAATTCGACCAGATTCTGGAGAGAATCATGAAGGATCATGAAGAGAAAGAAGGAACAGGGGACATGATGGATATTATGTTACAAGTTTATAGAGATCCACATGCTGAAGTGAGGTTAACAAGGAATGATATCAAGGCTTTCTTCCTAGATATTTTCCTTGCGGGAACAGACACTTCTTCAGTGGCATCACAATGGACCATGGCAGAGATCATGAACAATCCACGAGTGTTAAAGAAGCTAAGGACAGAGATTGATGCAGTGGTGGGGACTAGCAGGTTGGTGAGTGAATCAGATGTTCCAAATTTACCTTACCTCCAAGCTATTGTGAAGGAAGTGTTAAGACTCCATCCACCAGCACCCTTTGCTCTTAGACAATCTATAGAAGACTGCAGAGTCAACGGCTATGATGTAAAGGGCCAGACCAGGACACTAATTAATGTCTATGCCATCATGAGGGACCCAGAAGCATGGGTCAACCCAGAGGAGTTTATACCGGAGAGGTTCTTGGAAGGGATCAACGGTGGAGCTGAACATGAGATTAAAATGAACGGTGATGATTTTAGGTATATTCCATTTGGGTTTGGCAGGAGGGGATGTCCTGGGGCTTCCCTTGCTTTAACGGCGATACATGTGACAATTGCAGCGTTGTTCCAATGTTTTGAATGGAAAATCAAAGGGGGAGATAAGGTTAATATCGAAGAAGGATCATCATTTTCTACAGGATTAGCAAAGCCTCTAGTTTGTTACCCTATCACTCGTTTTAATCCTTTTTAA 1527 0.4335 MAAASVMFYIFFSSLALVVFTLLVKSLSKRTTNCSTKLRSPPSPPSLPIIGHLHLIGSVIPKSFQTLARSYGAPLMQLQLGASTCIVVSNAQVAKEVMKNHDLNFCNRPLFGSSEHFLYKGSYFIVAPYGPYWRFVKKLCVTQLLSSSQLGRFIHIREQERKKLLKSLFLCSTEARALDLCFELTCLTNNILCRMAMSTTCLDKANDAEQIHVLVRDFLHVGAKLSMGEVFGVLGKFDLFGYGKKLSKIVGKFDQILERIMKDHEEKEGTGDMMDIMLQVYRDPHAEVRLTRNDIKAFFLDIFLAGTDTSSVASQWTMAEIMNNPRVLKKLRTEIDAVVGTSRLVSESDVPNLPYLQAIVKEVLRLHPPAPFALRQSIEDCRVNGYDVKGQTRTLINVYAIMRDPEAWVNPEEFIPERFLEGINGGAEHEIKMNGDDFRYIPFGFGRRGCPGASLALTAIHVTIAALFQCFEWKIKGGDKVNIEEGSSFSTGLAKPLVCYPITRFNPF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3335g00001 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Gabi3335g00001 508 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 15 491 - -
Gabi3335g00001 508 SUPERFAMILY Cytochrome P450 36 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 Pfam Cytochrome P450 41 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3335g00001 508 CDD CYP93 74 501 - -
Gabi3335g00001 508 FunFam Cytochrome P450 family protein 32 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3335g00001 Gabi-Chr3335 6095 8215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3335g00001 10 508 Cytochrome P450 AT2G42250 51.874 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3335g00001 - - gmx:106794180 741.11