Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3334g00007 ATGAACACCCTTCGTCTCGCAGTGACAGCTCTATGCTGCATAGTGGTTGTGCTTGGAGGGTTACCCTTCTCCTCAGATGCACAACTAGATCCCTCGTTTTACAGGGATACTTGTCCTAAGGTTCATTCACTTGTTCGTGAAGTCGTAAGAGATGTTTCTAAAAAAGATCCCCGTATGCTTGCAAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGACGGATCAATTTTGTTGAACAACACTGCTACGATAGTGAGCGAGCAACAAGCATTGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAGATTAAGACATCGGTGGAAAGTGCTTGTCCTGGCGTAGTTTCTTGTGCTGATATTCTTGCCCTTGCAGCTCAGATATCTTCTATTCTGGCTGGTGGTCCTAATTGGAAAGTTCCTCTGGGAAGAAGGGATAGTTTAACAGCAAACCGAGACCTTGCTAATCAAAACCTTCCGGGTCCTAACTTCAACCTATCTGCACTTAAATCTGCCTTTGCTGTTCAAGGCCTTGACACTAATGATCTAGTTACACTTTCAGGTGCTCATACATTTGGCAGAGCTCATTGCTTTTTATTCTCTGACCGATTGTACAACTTCAGCGGTACCGGCAAACCTGATCCAACTCTTGACACAACTTACTTACAACAATTGCGCAAAATATGCCCCCAAGGTGCAACAAATCTCGCCAATTTCGACCCAACAACACCTGATACATTCGACAAGAACTACTACTCCAATCTTCAGGGTCAAAAGGGCTTGCTTCAGAGTGACCAAGAACTATTCTCAACAAAAGGTGCAGATACCATTAGCATTGTCAACAAGTTCGGTAGTAGCCAAGATGCTTTCTTTGATAGCTTTAAGGCTTCAATGATAAAGATGGGTAACATTGCTGTGCTAACGGGAACAAAAGGAGAAATCCGAAAACAATGCAATTTTGTTAACAAAAAATCTGCAGAACTTGATATAGCCAGTGTGGCCTCCTCCAAAGAATCATCGGAGCAGGGTATGGTTAGTTCATTCTAA 1065 0.43 MNTLRLAVTALCCIVVVLGGLPFSSDAQLDPSFYRDTCPKVHSLVREVVRDVSKKDPRMLASLVRLHFHDCFVQGCDGSILLNNTATIVSEQQALPNNNSIRGLDVVNQIKTSVESACPGVVSCADILALAAQISSILAGGPNWKVPLGRRDSLTANRDLANQNLPGPNFNLSALKSAFAVQGLDTNDLVTLSGAHTFGRAHCFLFSDRLYNFSGTGKPDPTLDTTYLQQLRKICPQGATNLANFDPTTPDTFDKNYYSNLQGQKGLLQSDQELFSTKGADTISIVNKFGSSQDAFFDSFKASMIKMGNIAVLTGTKGEIRKQCNFVNKKSAELDIASVASSKESSEQGMVSSF 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3334g00007 354 ProSiteProfiles Plant heme peroxidase family profile. 28 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 CDD secretory_peroxidase 28 327 IPR033905 GO:0004601|GO:0042744
Gabi3334g00007 354 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 SUPERFAMILY Heme-dependent peroxidases 28 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 Gene3D - 33 328 - -
Gabi3334g00007 354 FunFam Peroxidase 166 307 - -
Gabi3334g00007 354 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00007 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gabi3334g00007 354 Gene3D Peroxidase, domain 2 166 307 - -
Gabi3334g00007 354 FunFam Peroxidase 32 175 - -
Gabi3334g00007 354 PANTHER PEROXIDASE 72-RELATED 26 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3334g00007 Gabi-Chr3334 102401 104732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3334g00007 14 328 Peroxidase AT5G06720 56.467 2.20e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3334g00007 K00430 - gmx:547499 563.918