Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3334g00001 ATGAGTTCTCTTGGTCTAGTAGCGACAGCTATCTGTGTAGTGGTTGTGCTTGGAGGACTACCCTTCTCCTCAGATGCACAGCTAGATCCTTCGTTTTACCAGGATACTTGTCCCAAGGTGCATAAAATTGTACATAATGTCCTAAAGAACGTTTCAAAATCGGATCCACGTATGCTTGCAAGTCTCGTCAGGCTTCACTTTCATGACTGTTTTGTTCAAGGCTGTGACGGATCAATTTTGTTGAACAACACTGCAACGATTGTGAGCGAGCAACAAGCAGCGCCAAATAACAACTCAATAAGAGGTTTGGATGTTGTGAACCAGATTAAGACAGCGGTGGAAAATACTTGTCCTGGCGTAGTTTCTTGCGCTGATATTCTTACCCTTGCTGCCGAAGCATCTTCTGTTCTGGCTCATGGTCCTTCTTGGGAAGTTCCGTTGGGAAGAAGGGATAGTCTAACAGCAAACCGAACTCTTGCAAATCAAAACCTTCCATCTCCTTTCTTCAACCTAACTCAACTTAAATCCTCCTTTGCTGCTCAAGGCCTCAATACTACTGATCTAGTTGCACTCTCAGGTGCTCATACATTTGGCAGGGGTCATTGCGCTTTTTTCGTTAACCGATTGTACAACTTCAGCGGCACTGGCAAACCTGATCCAACACTCAACACAACTTACTTACAAGCATTGCGCATAATATGCCCCAAAGGTGGATCCGGGACTAACCTCACCAATTTGGACCCCACCACACCTGATAAATTCGACAAGAACTACTACGTTAATCTTAAGGATCATAAAGGCCTTTTTCAGAGTGACCAAGAACTGTTCTCAACATCAGGTGCAGATACCATTAGCATTGTCAATGAATTCCGTACTAAACAAGAAGTTTTCTTTGAGGCCTTTAAGGCTTCAATGATAAAGATGGGTAATATTGGTGTGCTAACGGGGAAAAAAGGAGAAATTCGAAAACAATGTAACTTTGTTAACAAAAAATCTGCTGAACTAGACATAGCCATCGTTTCCTCCGAGGAATCATCCGAAGAGGGTATGTTTAGCTCAATCTAA 1065 0.4291 MSSLGLVATAICVVVVLGGLPFSSDAQLDPSFYQDTCPKVHKIVHNVLKNVSKSDPRMLASLVRLHFHDCFVQGCDGSILLNNTATIVSEQQAAPNNNSIRGLDVVNQIKTAVENTCPGVVSCADILTLAAEASSVLAHGPSWEVPLGRRDSLTANRTLANQNLPSPFFNLTQLKSSFAAQGLNTTDLVALSGAHTFGRGHCAFFVNRLYNFSGTGKPDPTLNTTYLQALRIICPKGGSGTNLTNLDPTTPDKFDKNYYVNLKDHKGLFQSDQELFSTSGADTISIVNEFRTKQEVFFEAFKASMIKMGNIGVLTGKKGEIRKQCNFVNKKSAELDIAIVSSEESSEEGMFSSI 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3334g00001 354 Gene3D - 32 329 - -
Gabi3334g00001 354 SUPERFAMILY Heme-dependent peroxidases 27 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 Gene3D Peroxidase, domain 2 165 308 - -
Gabi3334g00001 354 CDD secretory_peroxidase 27 328 IPR033905 GO:0004601|GO:0042744
Gabi3334g00001 354 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 FunFam Peroxidase 31 176 - -
Gabi3334g00001 354 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Gabi3334g00001 354 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3334g00001 354 FunFam Peroxidase 165 308 - -
Gabi3334g00001 354 PANTHER PEROXIDASE 72-RELATED 25 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3334g00001 Gabi-Chr3334 6560 10253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3334g00001 11 333 Peroxidase AT5G06730 58.204 6.17e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3334g00001 K00430 - gmx:112997600 547.74