Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3333g00032 ATGGGTAAAACTCTAGACATGAGTATAATGCTCTCTAGCTTGGTTCTAATTCTCTCAGTTAATTCCTCATTGGCGTCAGTATCTTTGAAGGTTGATTTCTACAAAACTACATGTCCATCTGCAGAAGCAATAGTGAGAAGAGCTGTAAACAAAGCCATTTCTCTTAACCCTGGCATCGCTGGTGGCTTAATCAGAATGCATTTTCATGATTGCTTTGTGAGGGGCTGTGATGGTTCTGTATTATTAGAATCCACACCAGGTTACCAATCTGAGAGAGACCACCCTGCCAACTACCCAAGCTTACGTGGCTTCGAGGTTATTGATGATGCTAAGTCCCAAATAGAGGCTGTGTGTCCTGAAACTGTGTCATGTGCAGATATTGTTGCTTTTGCTGCTAGAGATAGTGCTAGCAAACTTGGGGGCTTAAAATATGCAGTACCAGCAGGACGTAGAGATGGTCGCATCTCTATTAGCGACGAAGTGGGACAAAATCTGCCATCACCAAAATTCAATGCTGAGGAACTTATAAATTACTTTGCTCGAAAAGGGTTGTCAGCAGAAGAAATGGTGACACTTTCAGGAGCACATTCTATAGGTGTATCACATTGTTCCTCCTTCTCTGACCGTTTATACTCTTTCAATGCCACTTTTTCTCAAGATCCCTCTATGGACCCTACGTTTGCTACATTGTTGAAAACCAAGTGTCCACCACGGAGCAATGGTGGTAGTACAGACCCAACGGTGGTGCTCGATGCTTACACGCCTAACCGTTTGGATAACAAGTACTATAAGGGACTGAAGAACCACCGTGGTTTGTTGAACTCAGATCAGACTTTGCTCGGAAGCAGTTCAATAAGGCAAATGGTGCTAAGTAATGCTAAACATGGTTCAAGTTGGGCAGTGAAGTTTGCTAATGCAATGGTGCACATGGGTTCCATAGATGTGGTGACAGGATCAGAAGGTGAGATTAGGAGGCTTTGTAGCGTCGTTAATTAA 996 0.4337 MGKTLDMSIMLSSLVLILSVNSSLASVSLKVDFYKTTCPSAEAIVRRAVNKAISLNPGIAGGLIRMHFHDCFVRGCDGSVLLESTPGYQSERDHPANYPSLRGFEVIDDAKSQIEAVCPETVSCADIVAFAARDSASKLGGLKYAVPAGRRDGRISISDEVGQNLPSPKFNAEELINYFARKGLSAEEMVTLSGAHSIGVSHCSSFSDRLYSFNATFSQDPSMDPTFATLLKTKCPPRSNGGSTDPTVVLDAYTPNRLDNKYYKGLKNHRGLLNSDQTLLGSSSIRQMVLSNAKHGSSWAVKFANAMVHMGSIDVVTGSEGEIRRLCSVVN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3333g00032 331 Gene3D - 32 331 - -
Gabi3333g00032 331 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 Gene3D Peroxidase, domain 2 166 310 - -
Gabi3333g00032 331 PANTHER PEROXIDASE 25-RELATED 18 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 CDD secretory_peroxidase 29 330 IPR033905 GO:0004601|GO:0042744
Gabi3333g00032 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gabi3333g00032 331 Pfam Peroxidase 45 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3333g00032 331 FunFam Peroxidase 166 310 - -
Gabi3333g00032 331 FunFam Peroxidase 32 174 - -
Gabi3333g00032 331 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3333g00032 Gabi-Chr3333 354263 355361 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3333g00032 14 331 Peroxidase AT1G14540 44.514 1.23e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3333g00032 K00430 - qsa:O6P43_010907 497.278