Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3333g00012 | ATGCGCCGAGGCAGAGCCGCAGATCCAACGCCACCACCACCGCCACCACCAACCGCCGAAAACCCCGTCAAGGAAACGCGATTCCGCGGCGTTAGAAAGCGTCCATGGGGCCGATTCGCCGCGGAGATCAGAGATCCGTGGAAGAAGGCTCGCGTTTGGCTCGGCACATTCGACTCCGCCGAGGACGCCGCCAGAGCCTACGACGCCGCCGCCCGCTCCTTCCGCGGTCCCAAAGCCAAGACCAACTTTCCCTTCGCTAACCCTGAAATCGATCAGATTCCCCTCTTTCATCATCACGATTTCCAAGACGACCACGTGAACCGGTTCTCAAAGTTCGACCCGGTTCACGTGAACCGCCCCACCTCCAGCGGGATGAGCAGCACCGTCGAGTCCTTCAGCGGTCCTAGGGTTCCGGTTCCGTCCTCCTCCACCACCGTCCCCAGGGTCCGTCCTCGCAGACCCGTCAACCCCGTTCCCGTCGACGATTGCCACAGCGATTGCGATTCTTCCTCCTCCGTCATCGACGATGAGGATTGCGTGCTCACCTCTTCGTTCCGGAAAACCCTACCTTTCGATCTGAACCTTCCACCGGCGCCGCCGGCCGATGACGACGCCGATTTCACCGCCGACGAGCTCCTAGCCACCGCCTTGTGTCTCTGA | 660 | 0.6197 | MRRGRAADPTPPPPPPPTAENPVKETRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEDAARAYDAAARSFRGPKAKTNFPFANPEIDQIPLFHHHDFQDDHVNRFSKFDPVHVNRPTSSGMSSTVESFSGPRVPVPSSSTTVPRVRPRRPVNPVPVDDCHSDCDSSSSVIDDEDCVLTSSFRKTLPFDLNLPPAPPADDDADFTADELLATALCL | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3333g00012 | 219 | CDD | AP2 | 26 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi3333g00012 | 219 | ProSiteProfiles | AP2/ERF domain profile. | 27 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi3333g00012 | 219 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 21 | 180 | - | - | |
Gabi3333g00012 | 219 | SUPERFAMILY | DNA-binding domain | 27 | 85 | IPR016177 | GO:0003677 | |
Gabi3333g00012 | 219 | FunFam | Ethylene-responsive transcription factor 2 | 26 | 85 | - | - | |
Gabi3333g00012 | 219 | MobiDBLite | consensus disorder prediction | 120 | 162 | - | - | |
Gabi3333g00012 | 219 | PRINTS | Ethylene responsive element binding protein signature | 50 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi3333g00012 | 219 | PRINTS | Ethylene responsive element binding protein signature | 28 | 39 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi3333g00012 | 219 | Gene3D | AP2/ERF domain | 26 | 86 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi3333g00012 | 219 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Gabi3333g00012 | 219 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Gabi3333g00012 | 219 | Pfam | AP2 domain | 26 | 76 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi3333g00012 | 219 | MobiDBLite | consensus disorder prediction | 120 | 149 | - | - | |
Gabi3333g00012 | 219 | SMART | rav1_2 | 27 | 90 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3333g00012 | Gabi-Chr3333 | 132741 | 134092 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3333g00012 | 1 | 219 | AP2-EREBP Transcription Factor Family | AT1G50640 | 49.372 | 6.76e-44 | 145 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Gabi3333g00012 | AP2 | 2.1e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3333g00012 | K09286 | - | qsa:O6P43_014526 | 208.764 |