Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3331g00046 ATGAGGCCTACCATGATGCTCAGGGCTCTGAACAAGCAGTTTATCGGAATCTTCGGTGATGCAGCAAACGTCGGTGTTAAGAAGCCGCCGCCACCGCCTCCTACTCCGGTGTCGCGAAAACCGGCGTTCGTGGATGCATTCCTATACAAAATGAAGAAGAACCGAGCTCTTCTGGCAAACAAGACCATTTGGTCGCGGAGATCCACTATCTTGCCGGAATTCGTTGATTCCACCGTCAAGATTTACAACGGGAAAACCACCGTACGGTGTAAGATCACTGAGGGAAAAGTGGGTCATAAATTTGGAGAGTTTGCTCTCACCAGGAAACGCAAAACCAGAGAACAATCCATTGCCAAAAATGTTAAACAAATCAAGAAAAAAAAGTGA 387 0.4703 MRPTMMLRALNKQFIGIFGDAANVGVKKPPPPPPTPVSRKPAFVDAFLYKMKKNRALLANKTIWSRRSTILPEFVDSTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKTREQSIAKNVKQIKKKK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3331g00046 128 ProSitePatterns Ribosomal protein S19 signature. 83 107 IPR020934 GO:0003723
Gabi3331g00046 128 Hamap 30S ribosomal protein S19 [rpsS]. 6 119 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 36 118 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 SUPERFAMILY Ribosomal protein S19 39 112 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 PRINTS Ribosomal protein S19 family signature 83 95 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 PRINTS Ribosomal protein S19 family signature 63 82 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 PRINTS Ribosomal protein S19 family signature 95 110 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 FunFam Ribosomal protein S19, mitochondrial 35 122 - -
Gabi3331g00046 128 Gene3D 30s Ribosomal Protein S19; Chain A 36 125 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gabi3331g00046 128 Pfam Ribosomal protein S19 42 111 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3331g00046 66 109 Cytoplasmic Ribosomal Protein Gene Family AT5G09490 38.636 7.57e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3331g00046 K02965 - gmx:100782150 191.43