Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3331g00015 ATGGCCACTGCTAGTCCAAAGCATGAGAAGATGCACAAGAATCTAAGTACACAGCTAGCTGTTGCAGTAAGAAGTATCCAATGGAGCTATGGGATTTTCTGGGCACCTTCAACCACTGAAGAAAGAGTACTGGAATGGAGGGATGGATACTATAATGGGGACATTAAGACAAGGAAGACAGTTCAAACCATGGAAATGAAAGCTGATAAGATAGGCTTGCAGAGGAGTGAGCAACTGAAAGAGCTATACAAGTTTCTTCATGAAGGTGAAGCTGACCCTCATACTAAAAGACCTTCTGATGCATTATCTCCAGAGGATCTCTCAGACTCAGAGTGGTATTACTTGATTTGCATGTCCTTTGTATTCAGTCCCAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGAAACAATCTGGTTATGTAATGCTCAATATGCAGATAGTAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCATCAATTCAGACTGTGGTGTGTTTTCCATACCTGGGAGGCGTTATTGAGATAGGCACAACTGAACTGGTGTCGGAGGATCCTAATCTCATTCAACATGTCAAGGCTTGTCTCTTAGAAATCTCAAAGCCTATTTGCTCTGATAAATCTTCCTCATCCCTTTATAAACCAGATGATGACGAATATCCAACATGCACCAAGGTTGACCATGGGATGTTAGATAAAATGGCTTTGGATAATTCATGTTCTCATGCAGAAGAAATCAAATTTGAACAAGATCCTGTGAAGGAATTACAAGATGATAACAATGAAGATTTTAACATGGATTCTCCGGGTGGATGTTCTAATGGTTGTGAGCACCATTGCCATATGGATGAATCCATGATTGATGGCATCAATAGTGGGCCTTCTCAAGTTCATATTTTGAAGGATGCCTTAGTCAAAATAGCCCCAGATTCTCTGAGTTCTTGTAATTGTATGTCTGAAGCTTCTAAGGATGCAAGCCAAATTCAACTAAGGGAACTTCAAGACTGCAATCAATCAAAAAGGAGCTCCTTTGATATTGGAGCTGATGAAGACTTGTACTATACAAGAACTCTTTGTGCTATTTTGGGAAATTCATCAACATTTAAACAAAACTCATGTGCTAATAACTCAAATTGCAAATCCAGTTTTGTGAAATGGAAGAAAGGAGGGATTTCTGAAAGGAAGAGGCCACGGTTGAACCAAAGCATGTTAAAGAAGACTTTGTTTAATGTCCCTTTTATGCACAGAAGTTGCTCTTATCTCAAGCCACAAAAAGAAAATGACAGAATAGAATGGACTAGTAAATTGGAAAATGAAGATAATTTCATTGGAAACGGCTTCTCTGATATAAAAAGAGAAACTAAAAACTTTCAGGTCCTCAAATCTGTAATTCCTTCTTCTATAAGTCAGGTGGAGAAGATTTCAATCCTTGAGGACACAATTAAATACTTGAAAGAACTTGAAGCTAGAGTGGGAGAACTAGAATCTTGCATGGACATTGCACATTCTGAATCAACAACCAGAAGAAAATGCCCAGATGTGTTAGAGCAGATATCAGATAACTATGGTCCCAGAAAGATTTACATGGGCATGAAACCTTGGATAAACAAGAGGAAGGCTTGTGATATTGAAGAGATAAACACAGAGGTAGATAGAATTGTTTCTGAAGAAGATAAGCCATCGGATGTGAAAGTCAACATGAAGCAGCAAGAGGTTCAGATTGAGATGAAATGTCCTTACAGGGAATACATATTGCATGATATCATGGATGCCATAAACAATCTGCATTTAGATGCCCACACAGTTGAATCGTCAACAACTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACTGCATCAATGGGGATGATAAAAAAAGCACTATTGAAAGTATCTGGAAATATTTGA 1932 0.3861 MATASPKHEKMHKNLSTQLAVAVRSIQWSYGIFWAPSTTEERVLEWRDGYYNGDIKTRKTVQTMEMKADKIGLQRSEQLKELYKFLHEGEADPHTKRPSDALSPEDLSDSEWYYLICMSFVFSPNQSLPGRALEIGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVSEDPNLIQHVKACLLEISKPICSDKSSSSLYKPDDDEYPTCTKVDHGMLDKMALDNSCSHAEEIKFEQDPVKELQDDNNEDFNMDSPGGCSNGCEHHCHMDESMIDGINSGPSQVHILKDALVKIAPDSLSSCNCMSEASKDASQIQLRELQDCNQSKRSSFDIGADEDLYYTRTLCAILGNSSTFKQNSCANNSNCKSSFVKWKKGGISERKRPRLNQSMLKKTLFNVPFMHRSCSYLKPQKENDRIEWTSKLENEDNFIGNGFSDIKRETKNFQVLKSVIPSSISQVEKISILEDTIKYLKELEARVGELESCMDIAHSESTTRRKCPDVLEQISDNYGPRKIYMGMKPWINKRKACDIEEINTEVDRIVSEEDKPSDVKVNMKQQEVQIEMKCPYREYILHDIMDAINNLHLDAHTVESSTTDGVLTLTLKSKFRGAATASMGMIKKALLKVSGNI 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3331g00015 643 PANTHER TRANSCRIPTION FACTOR TT8 11 640 - -
Gabi3331g00015 643 Coils Coil 486 506 - -
Gabi3331g00015 643 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 197 IPR025610 -
Gabi3331g00015 643 Gene3D - 453 520 IPR036638 GO:0046983
Gabi3331g00015 643 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 458 515 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3331g00015 Gabi-Chr3331 168002 172479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3331g00015 1 640 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 39.239 1.08e-129 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3331g00015 - - gmx:100783746 954.896