Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3331g00014 ATGGCCACTGCTAGTCCAAAGCATGAGAAGATGCACAAGAATCTAAGTACACAGCTAGCTGTTGCAGTAAGAAGTATCCAATGGAGCTATGGGATTTTCTGGGCACCTTCAACCACTGAAGAAAGTAGAGTACTGGAATGGAGGGATGGATACTATAATGGGGACATTAAGACAAGGAAGACAGTTCAAACCATGGAAATGAAAGCTGATAAGATAGGCTTGCAGAGGAGTGAGCAACTGAAAGAGCTATACAAGTTTCTTCATGAAGGTGAAGCTGACCCTCATACTAAAAGACCTTCTGATGCATTATCTCCAGAGGATCTCTCAGACTCAGAGTGGTATTACTTGATTTGCATGTCCTTTGTATTCAGTCCCAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGAAACAATCTGGTTATGTAATGCTCAATATGCAGATAGTAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCATCAATTCAGACTGTGGTGTGTTTTCCATACCTGGGAGGCGTTATTGAGATAGGCACAACTGAACTGGTGTCGGAGGATCCTAATCTCATTCAACATGTCAAGGCTTGTCTCTTAGAAATCTCAAAGCCTATTTGCTCTGATAAATCTTCCTCATCCCTTTATAAACCAGATGATGACGAATATCCAACATGCACCAAGGTTGACCATGGGATGTTAGATAAAATGGCTTTGGATAATTCATGTTCTCATGCAGAAGAAATCAAATTTGAACAAGATCCTGTGAAGGAATTACAAGATGATAACAATGAAGATTTTAACATGGATTCTCCGGGTGGATGTTCTAATGGTTGTGAGCACCATTGCCATATGGATGAATCCATGATTGATGGCATCAATAGTGGGCCTTCTCAAGTTCATATTTTGAAGGATGCCTTAGTCAAAATAGCCCCAGATTCTCTGAGTTCTTGTAATTGTATGTCTGAAGCTTCTAAGGATGCAAGCCAAATTCAACTAAGGGAACTTCAAGACTGCAATCAATCAAAAAGGAGCTCCTTTGATATTGGAGCTGATGAAGACTTGTACTATACAAGAACTCTTTGTGCTATTTTGGGAAATTCATCAACATTTAAACAAAACTCATGTGCTAATAACTCAAATTGCAAATCCAGTTTTGTGAAATGGAAGAAAGGAGGGATTTCTGAAAGGAAGAGGCCACGGTTGAACCAAAGCATGTTAAAGAAGACTTTGTTTAATGTCCCTTTTATGCACAGAAGTTGCTCTTATCTCAAGCCACAAAAAGAAAATGACAGAATAGAATGGACTAGTAAATTGGAAAATGAAGATAATTTCATTGGAAACGGCTTCTCTGATATAAAAAGAGAAACTAAAAACTTTCAGGTCCTCAAATCTGTAATTCCTTCTTCTATAAGTCAGGTGGAGAAGATTTCAATCCTTGAGGACACAATTAAATACTTGAAAGAACTTGAAGCTAGAGTGGGAGAACTAGAATCTTGCATGGACATTGCACATTCTGAATCAACAACCAGAAGAAAATGCCCAGATGTGTTAGAGCAGATATCAGATAACTATGGTCCCAGAAAGATTTACATGGGCATGAAACCTTGGATAAACAAGAGGAAGGCTTGTGATATTGAAGAGATAAACACAGAGGTAGATAGAATTGTTTCTGAAGAAGATAAGCCATCGGATGTGAAAGTCAACATGAAGCAGCAAGAGGTTCAGATTGAGATGAAATGTCCTTACAGGGAATACATATTGCATGATATCATGGATGCCATAAACAATCTGCATTTAGATGCCCACACAGTTGAATCGTCAACAACTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACTGCATCAATGGGGATGATAAAAAAAGCACTATTGAAAGTATCTGGAAATATTTGA 1935 0.386 MATASPKHEKMHKNLSTQLAVAVRSIQWSYGIFWAPSTTEESRVLEWRDGYYNGDIKTRKTVQTMEMKADKIGLQRSEQLKELYKFLHEGEADPHTKRPSDALSPEDLSDSEWYYLICMSFVFSPNQSLPGRALEIGETIWLCNAQYADSKVFSRSLLAKSASIQTVVCFPYLGGVIEIGTTELVSEDPNLIQHVKACLLEISKPICSDKSSSSLYKPDDDEYPTCTKVDHGMLDKMALDNSCSHAEEIKFEQDPVKELQDDNNEDFNMDSPGGCSNGCEHHCHMDESMIDGINSGPSQVHILKDALVKIAPDSLSSCNCMSEASKDASQIQLRELQDCNQSKRSSFDIGADEDLYYTRTLCAILGNSSTFKQNSCANNSNCKSSFVKWKKGGISERKRPRLNQSMLKKTLFNVPFMHRSCSYLKPQKENDRIEWTSKLENEDNFIGNGFSDIKRETKNFQVLKSVIPSSISQVEKISILEDTIKYLKELEARVGELESCMDIAHSESTTRRKCPDVLEQISDNYGPRKIYMGMKPWINKRKACDIEEINTEVDRIVSEEDKPSDVKVNMKQQEVQIEMKCPYREYILHDIMDAINNLHLDAHTVESSTTDGVLTLTLKSKFRGAATASMGMIKKALLKVSGNI 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3331g00014 644 Gene3D - 454 521 IPR036638 GO:0046983
Gabi3331g00014 644 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 15 198 IPR025610 -
Gabi3331g00014 644 Coils Coil 487 507 - -
Gabi3331g00014 644 PANTHER TRANSCRIPTION FACTOR TT8 11 641 - -
Gabi3331g00014 644 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 459 516 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3331g00014 Gabi-Chr3331 168002 172479 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3331g00014 1 641 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 39.327 1.28e-128 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3331g00014 - - gmx:100783746 950.273