Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00046 ATGCCTCTAACCTGCGCCGCCGCTGACCCCGCCGTCTCCGGCGCCGGCGAGATCATGCTCTTCGGAGTGAGGGTCGTGGTCGATTCGATGAGGAAGAGCGTGAGCATGAACAACCTCTCGCAGTACGAGCACCCTCACGACGCCTCAAACAACAAAGAAGACACTCTCGCCGCCGGCTACGCCTCCGCCGACGACGCCGTTCCTCACGGCTCCGGCAAGCATCGTGACCGCGAGCGCAAGCGAGGGATTCCATGGACGGAGGAAGAGCACAAGCTATTCTTGCTTGGATTGCAGAGAGTGGGGAAAGGTGATTGGAGAGGGATATCAAGGAACTACGTGAAGACGCGGACGCCAACGCAGGTTGCTAGTCATGCTCAGAAGTACTTTCTCCGCCGTAGCAACCTCAATCGCCGTCGTCGTAGATCCAGCCTCTTTGACATCACCACCGATTCGGTCTCTGCAATCCCGATGGAGGAAGATTATGTCTCTCGTTTGCATCCCATGTACCCTGCAACCCCTGAAAGCAGCCACGTGAATGGATTTCCATTGATGCCCATGTATCCAATGGGTGTTGTTTCTGGAGTCACTTCAGTCCAAGTTGGGAATCCAATGGAAAATCTCTCTTTGGGACAAGGAAATGTGGAACAGAATGAGCCAACCAAGCTAGTATGTACAATTCCTGTTGTTCCAGATCATAAAGCTTCTACAGTGTCTGATATCACTGCTAGTTTGAGTTCAGCTGTTGACCCACCAACACTGTCCCTCGGGCTGTCCTTGTCATCTAGTCAAAGACAAACATCATCAAGACATTCAGCTTTACATGCAATGCCGTGTTTCAATAATGGAGATAGCATCATAAGCGTTGCTTGA 870 0.5207 MPLTCAAADPAVSGAGEIMLFGVRVVVDSMRKSVSMNNLSQYEHPHDASNNKEDTLAAGYASADDAVPHGSGKHRDRERKRGIPWTEEEHKLFLLGLQRVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSAIPMEEDYVSRLHPMYPATPESSHVNGFPLMPMYPMGVVSGVTSVQVGNPMENLSLGQGNVEQNEPTKLVCTIPVVPDHKASTVSDITASLSSAVDPPTLSLGLSLSSSQRQTSSRHSALHAMPCFNNGDSIISVA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00046 289 Gene3D - 83 135 - -
Gabi3329g00046 289 FunFam transcription factor MYB1R1 83 134 - -
Gabi3329g00046 289 ProSiteProfiles SANT domain profile. 85 133 IPR017884 -
Gabi3329g00046 289 SMART sant 81 131 IPR001005 -
Gabi3329g00046 289 NCBIfam myb-like DNA-binding domain, SHAQKYF class 80 131 IPR006447 GO:0003677
Gabi3329g00046 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 133 IPR017930 -
Gabi3329g00046 289 CDD SANT 84 129 IPR001005 -
Gabi3329g00046 289 ProSiteProfiles Myb-like domain profile. 77 129 IPR001005 -
Gabi3329g00046 289 Pfam Myb-like DNA-binding domain 84 129 IPR001005 -
Gabi3329g00046 289 SUPERFAMILY Homeodomain-like 79 134 IPR009057 -
Gabi3329g00046 289 PANTHER TRANSCRIPTION FACTOR KUA1 8 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3329g00046 Gabi-Chr3329 454630 456804 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi3329g00046 Myb_DNA-binding 7.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3329g00046 - - gmx:778057 400.979