Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00033 ATGTCCCAAGGATCTCCTCTCTCTCCTCCTCCTCCTCCTCCGCTTCCAACCGCCGAACCCTGCAACCAACCCTCGTCGGAACCCGATACCCACAAGGAGGAAACCACCACCACCACCACCACAAACAACGCCGCCCCTCCTCCCGCCACCACACGGAACCGCCCCTCCCGCGCCTGCACCATTCGCGCCGCTGCCCGCCTCTATTCTGCGTCGCAGCAGGAGCGCCGGCCCAAAGCCGCGAAGAAGGAGCAGCGCCGCGAGGTCTCGCCATCGCCGTCGCCGCAGTCGCAGCAGCTGCAGCAATGCAGCAAGATCGTGACTCCGCTGGTGGAACCGCCCCCGCTCTCTCAGTTGCCGCGGTGGAAACTCCGGTCCATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGCATCTATTTAGGCCTCTTTTGAATATATCAGTAGAATTCTCGGCTGAAGAATTCGAGACAGCTCTTCTTACCCCCAATGACACATTGAGTGATATACATATGCCTTTGCTAAAGGCAATCCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGGTAACTGTACTATGCAGAAAACTGAGAGATTGGTGGCACTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGTATATAAATCACTTGATCCAGAGGTCCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTCGAGCAAGAAGATATCCGGAGTTACATTGACAACTCACTCAAACATGGTGTTCAACTTTCAACATTCCGTAAGGAGCGTATTGGTGGTGATTCACATGGAGTCTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGGGAAATAAGAAAAACTGAAGTGGTTCCACTGAAGAAAGGCAAACCAAGAGGTTCCCAGGAGAAGCTTTTCTCAAGTAAAAACAGAATGGAGGCTTCTGTAGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATCGAGAAAGTTCACAAGAGAAAGGAGAGGTCTCTGAAAAGGCAGCACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGACTTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGATCCATCAATGAGGCAATCAAGATAACCAAACGGAAACAACCATCCCCAGAACCTATACCCAGGAGAGAAGCAGGAGCAAAACCGGAAGCTTTAACTAATGGTAAATGGAGTGGTCCTTCACATGCTTCTCAACATCTGAATTTCGATGTGACATCCCCAAAATCATCTGACTTTGATGATGTGGAGGAAGATCATCAAACTGACACAATGGATCGAAGCAATCGGAGAAGACAGAGGCCTAGTCGGTATTCAGAGAAAGAGTTCGTTGAAGCAGTGTCAGATAATGATGCTGACTTTGACAGTGACGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCCGGAAACGCAAGCAGAGCAGGAAGGGTTCTAGTAGCTCAGCCTCCGAAGGAGATGAAGAATATCACTGGGATGAAGACAATGTTGAAGATGAAGAAGAAGAAGATGAAGAAGAAGATTCCTCGAGTGTCAGTGAGGATAGTGAGAAGCCCCGTAAATTCAAGCAATTGCCAGGCCGTACTAGGAGGGAAACTAAACTAAGGTCTGTGGATGACATTCAATCAGGTCTAAGACGCAGTAAGAGAGCAACTAGAAACCGTATAAACTACCGACAGTATGAGATGTCTGAGTCAGAAACAGAGTTTGTTAAACCTGAGAAGTCTAATAATGCATCAGATGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGCAAAGTGAAGATTCAGATGACAATGATAATGAAGAAGTGGAAAAGAAAGTAGTTGAGCCTGATACTTACCCTGCAGTAGGAGAGAACCAATATCCTATTGCTTTAGGAGAGGAGAATGAACAAAACCAAAACCAGCCTCCTGAAAAATCAAGTAGTCCGGGTCAGGAGGAAGTTGAGGGCATGAGAAAGAGACGTTTCCTTGATTTGAATGAGCTTGCCCCTGCCTCAGGTTTTGATGATAGTCCAAATACAACAACAAAAGATGAAGGCAATGATGATTTATAA 2172 0.4664 MSQGSPLSPPPPPPLPTAEPCNQPSSEPDTHKEETTTTTTTNNAAPPPATTRNRPSRACTIRAAARLYSASQQERRPKAAKKEQRREVSPSPSPQSQQLQQCSKIVTPLVEPPPLSQLPRWKLRSMWELASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALSRDTWVTVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPEVRVVILKALCDIRVEQEDIRSYIDNSLKHGVQLSTFRKERIGGDSHGVSYWYEDDPIIGHRLYREIRKTEVVPLKKGKPRGSQEKLFSSKNRMEASVGKKLKIDMLPEIEKVHKRKERSLKRQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKQPSPEPIPRREAGAKPEALTNGKWSGPSHASQHLNFDVTSPKSSDFDDVEEDHQTDTMDRSNRRRQRPSRYSEKEFVEAVSDNDADFDSDDDIVGEAVYDEEYLRKRKQSRKGSSSSASEGDEEYHWDEDNVEDEEEEDEEEDSSSVSEDSEKPRKFKQLPGRTRRETKLRSVDDIQSGLRRSKRATRNRINYRQYEMSESETEFVKPEKSNNASDDHSDPSENGEYMMQSEDSDDNDNEEVEKKVVEPDTYPAVGENQYPIALGEENEQNQNQPPEKSSSPGQEEVEGMRKRRFLDLNELAPASGFDDSPNTTTKDEGNDDL 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00033 723 PANTHER REMODELING AND SPACING FACTOR 1 51 694 IPR028938 GO:0006355|GO:0031213
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 394 412 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 482 497 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 595 623 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 35 57 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 548 582 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 443 481 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 424 442 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 664 681 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 1 102 - -
Gabi3329g00033 723 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 222 252 IPR028942 -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 523 547 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 684 698 - -
Gabi3329g00033 723 MobiDBLite consensus disorder prediction 394 723 - -
Gabi3329g00033 723 Pfam DDT domain 131 176 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3329g00033 Gabi-Chr3329 347869 357670 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gabi3329g00033 DDT 6.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3329g00033 - - gmx:100796430 1014.99