Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00032 ATGTCCCAAGGATCTCCTCTCTCTCCTCCTCCTCCTCCTCCGCTTCCAACCGCCGAACCCTGCAACCAACCCTCGTCGGAACCCGATACCCACAAGGAGGAAACCACCACCACCACCACCACAAACAACGCCGCCCCTCCTCCCGCCACCACACGGAACCGCCCCTCCCGCGCCTGCACCATTCGCGCCGCTGCCCGCCTCTATTCTGCGTCGCAGCAGGAGCGCCGGCCCAAAGCCGCGAAGAAGGAGCAGCGCCGCGAGGTCTCGCCATCGCCGTCGCCGCAGTCGCAGCAGCTGCAGCAATGCAGCAAGATCGTGACTCCGCTGGTGGAACCGCCCCCGCTCTCTCAGTTGCCGCGGTGGAAACTCCGGTCCATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGCATCTATTTAGGCCTCTTTTGAATATATCAGTAGAATTCTCGGCTGAAGAATTCGAGACAGCTCTTCTTACCCCCAATGACACATTGAGTGATATACATATGCCTTTGCTAAAGGCAATCCCTCCCATTACACGAATGGCACTCTCACGTGATACTTGGGTAACTGTACTATGCAGAAAACTGAGAGATTGGTGGCACTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGGTTGAAGTATATAAATCACTTGATCCAGAGGTCCGTGTGGTCATCTTAAAAGCATTATGTGACATTCGTGTCGAGCAAGAAGATATCCGGAGTTACATTGACAACTCACTCAAACATGGTGTTCAACTTTCAACATTCCGTAAGGAGCGTATTGGTGGTGATTCACATGGAGTCTCTTATTGGTATGAAGATGACCCAATTATTGGTCATAGGTTGTATCGGGAAATAAGAAAAACTGAAGTGGTTCCACTGAAGAAAGGCAAACCAAGAGGTTCCCAGGTTCTTTCTACTACATCTTACCAGTGGGAAACAGTTGCTACAAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGAATGGAGGCTTCTGTAGGGAAAAAGCTGAAGATAGACATGCTTCCTGAAATCGAGAAAGTTCACAAGAGAAAGGAGAGGTCTCTGAAAAGGCAGCACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGACTTGCCCCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGATCCATCAATGAGGCAATCAAGATAACCAAACGGAAACAACCATCCCCAGAACCTATACCCAGGAGAGAAGCAGGAGCAAAACCGGAAGCTTTAACTAATGGTAAATGGAGTGGTCCTTCACATGCTTCTCAACATCTGAATTTCGATGTGACATCCCCAAAATCATCTGACTTTGATGATGTGGAGGAAGATCATCAAACTGACACAATGGATCGAAGCAATCGGAGAAGACAGAGGCCTAGTCGGTATTCAGAGAAAGAGTTCGTTGAAGCAGTGTCAGATAATGATGCTGACTTTGACAGTGACGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCCGGAAACGCAAGCAGAGCAGGAAGGGTTCTAGTAGCTCAGCCTCCGAAGGAGATGAAGAATATCACTGGGATGAAGACAATGTTGAAGATGAAGAAGAAGAAGATGAAGAAGAAGATTCCTCGAGTGTCAGTGAGGATAGTGAGAAGCCCCGTAAATTCAAGCAATTGCCAGGCCGTACTAGGAGGGAAACTAAACTAAGGTCTGTGGATGACATTCAATCAGGTCTAAGACGCAGTAAGAGAGCAACTAGAAACCGTATAAACTACCGACAGTATGAGATGTCTGAGTCAGAAACAGAGTTTGTTAAACCTGAGAAGTCTAATAATGCATCAGATGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGCAAAGTGAAGATTCAGATGACAATGATAATGAAGAAGTGGAAAAGAAAGTAGTTGAGCCTGATACTTACCCTGCAGTAGGAGAGAACCAATATCCTATTGCTTTAGGAGAGGAGAATGAACAAAACCAAAACCAGCCTCCTGAAAAATCAAGTAGTCCGGGTCAGGAGGAAGTTGAGGGCATGAGAAAGAGACGTTTCCTTGATTTGAATGAGCTTGCCCCTGCCTCAGGTTTTGATGATAGTCCAAATACAACAACAAAAGATGAAGGCAATGATGATTTATAA 2241 0.4623 MSQGSPLSPPPPPPLPTAEPCNQPSSEPDTHKEETTTTTTTNNAAPPPATTRNRPSRACTIRAAARLYSASQQERRPKAAKKEQRREVSPSPSPQSQQLQQCSKIVTPLVEPPPLSQLPRWKLRSMWELASVLNFLHLFRPLLNISVEFSAEEFETALLTPNDTLSDIHMPLLKAIPPITRMALSRDTWVTVLCRKLRDWWHWVADGDLPIVASHGAEVEVYKSLDPEVRVVILKALCDIRVEQEDIRSYIDNSLKHGVQLSTFRKERIGGDSHGVSYWYEDDPIIGHRLYREIRKTEVVPLKKGKPRGSQVLSTTSYQWETVATNFDEFQDVSEKLFSSKNRMEASVGKKLKIDMLPEIEKVHKRKERSLKRQHRQALLLDNFLGVDGLAPGRSLRDRKPVTYTFDDYDRSINEAIKITKRKQPSPEPIPRREAGAKPEALTNGKWSGPSHASQHLNFDVTSPKSSDFDDVEEDHQTDTMDRSNRRRQRPSRYSEKEFVEAVSDNDADFDSDDDIVGEAVYDEEYLRKRKQSRKGSSSSASEGDEEYHWDEDNVEDEEEEDEEEDSSSVSEDSEKPRKFKQLPGRTRRETKLRSVDDIQSGLRRSKRATRNRINYRQYEMSESETEFVKPEKSNNASDDHSDPSENGEYMMQSEDSDDNDNEEVEKKVVEPDTYPAVGENQYPIALGEENEQNQNQPPEKSSSPGQEEVEGMRKRRFLDLNELAPASGFDDSPNTTTKDEGNDDL 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 466 504 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 447 465 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 687 704 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 505 520 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 618 646 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 35 57 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 707 721 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 1 21 - -
Gabi3329g00032 746 Pfam DDT domain 131 176 IPR018501 -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 1 102 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 571 605 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 417 746 - -
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 417 435 - -
Gabi3329g00032 746 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 222 252 IPR028942 -
Gabi3329g00032 746 PANTHER REMODELING AND SPACING FACTOR 1 51 717 IPR028938 GO:0006355|GO:0031213
Gabi3329g00032 746 MobiDBLite consensus disorder prediction 546 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3329g00032 Gabi-Chr3329 347869 357670 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Gabi3329g00032 DDT 6.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3329g00032 - - gmx:100796430 1069.68