Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00029 ATGGATTATGTGGACTTGAATTTCTACCTTAACTCGAAGTGGGTATCGACGGTGGCTAGCATATGGATTCAGTGCACAAGTGGATCACTCTACACTTTCTCCATCTATTCTCAAACCCTCAAGTCAACTCAACACTATGATCAGTCAACGCTTGACATTGTCTCTGTCTCCAAGGACATCGGAGCCAACGTTGGTGTCCTCGCTGGTCTCTTATACGATTTCTTTGCCACCTCATCAACAACCGGGCCTTGGCTTGTCCACTTCTTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCCGCCGTCGCCGGCGTCCTTCCTCCGGTTCCCGTGCCGGTCATGTGTCTGTTCATGTTCGTCGCAGCTCATGCTCAGAGTTATTTTAACACTTCCAATGTTGTCACTGGTGTACATAATTTCCCTAACTACAGCGGAACCATAGTTGGCATCATGAAGGGGTTTCTTGGTCTCAGTGGAGCAATATTAATTCAAGTGTATCGGACAATATTCAACAACAAGCCTATGTCATATCTTCTGATGTTAGCACTTTTACCACCTGTAAATACTTTGCTGCTTATGTGGTTTGTGAGAATCCATAAAACTCATGAGGGAGAAGAAAGGAAGTATCTGAATTTGTTTTCTTTCATGGCTCTGGTTGTTGCTGCTTATCTTATGGTTGTTATAATCCTAGAGAACATCCTTAGTCTGCAATTATTGGTCCGCATTTTTGTACTCATTGTGCTTATTGGGTTGTTAGCCTCACTTCTTTGCATTGCATCTAAAGCACATGAAAGGGGCTCAAGTAGTGTTTCAGAAAATCTTCTTGATGAGGGGTCCCTACTAATTGTGGAACCAAGCCCCCTGGATACTGAGAAGGTAGATGCTAGGCATACTAGGACTAATACAAACAATCAAAGGACTTTGCAACTGGGAGAAAACCTGAATCTTTTCCAAGCAGTGCAAACTGTGAACTTTTGGATTTTGTTTGTTTCAATGGCGTGTGGTATGGGATCAGGACTTGCAACAGTTAATAATATTGGCCAAATAGGGGAATCTCTTGGTTATGCCAGCCATGAGACAAGTTCCTTGGTGTCTTTGTGGAGCATTTGGAATTTCCTTGGCCGGTTCGGAGCTGGTTATGTTTCAGACTATTTTTTGCACACAAGAGGTTGGGCAAGACCTTTATTTATGGTCATCACTTTAATTATCATGAGCATTGGTCATGTGGTCATTGCTTATGGACTGCCAGGTGCTCTATATGTTGGTTCAATATTGGTTGGTATTTGTTATGGCTCTCAGTGGTCCTTAATGCCTACAATCACTTCTGAAATATTTGGTGTGGGAAATTTGGGCAGCATATTCAACACCATTACCATTGCAGGTCCAGTGGGATCTTATATATTCTCTGTAAGAGTAGTTGGGTATATATATGACAAAGAAGCATCTGAAGGAAATACATGCATTGGAACTCATTGTTTTATGTTTCCTTTTCTCATAATGGCAGCTGCCGCAGTTCTGGGTTCTCTTGCAGCTTTGGTTTTGTTTTTGCGGACAAAAAACTTTTATAGTCAGGTTGTACTCAGTAGAATTCATATTTCATAA 1611 0.4227 MDYVDLNFYLNSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVSKDIGANVGVLAGLLYDFFATSSTTGPWLVHFLGSAQCFLGYFLMWAAVAGVLPPVPVPVMCLFMFVAAHAQSYFNTSNVVTGVHNFPNYSGTIVGIMKGFLGLSGAILIQVYRTIFNNKPMSYLLMLALLPPVNTLLLMWFVRIHKTHEGEERKYLNLFSFMALVVAAYLMVVIILENILSLQLLVRIFVLIVLIGLLASLLCIASKAHERGSSSVSENLLDEGSLLIVEPSPLDTEKVDARHTRTNTNNQRTLQLGENLNLFQAVQTVNFWILFVSMACGMGSGLATVNNIGQIGESLGYASHETSSLVSLWSIWNFLGRFGAGYVSDYFLHTRGWARPLFMVITLIIMSIGHVVIAYGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVGNLGSIFNTITIAGPVGSYIFSVRVVGYIYDKEASEGNTCIGTHCFMFPFLIMAAAAVLGSLAALVLFLRTKNFYSQVVLSRIHIS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00029 536 Pfam Nodulin-like 13 261 IPR010658 -
Gabi3329g00029 536 Gene3D MFS general substrate transporter like domains 318 525 IPR036259 -
Gabi3329g00029 536 Pfam Major Facilitator Superfamily 331 521 IPR011701 GO:0022857|GO:0055085
Gabi3329g00029 536 CDD MFS_Mch1p_like 12 510 - -
Gabi3329g00029 536 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 526 - -
Gabi3329g00029 536 SUPERFAMILY MFS general substrate transporter 215 523 IPR036259 -
Gabi3329g00029 536 SUPERFAMILY MFS general substrate transporter 17 202 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3329g00029 Gabi-Chr3329 317984 320559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3329g00029 10 534 Nodulin-like Gene Family AT1G74780 55.493 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3329g00029 - - lja:Lj1g3v0437880.2 839.721