Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00028 ATGATGATGAAGATGGAGTGGGTTGCGAATCGTTGGACATGTGTGGCGGCAGCAATATGGATCCAGTGGAGCTGCGGTGCATCATACACCTTCAGCATCTACTCCCCTGTTCTCAAGTCCACGCAAGGCTACGACCAATCAACCCTCGACACCGTTTCCGTCTTCAAAGACATTGGCGCCAATTTCGGCATCCTCTCCGGCCTCCTCTACTCCGCCGTCGCTCCGTACACCGACAGCCGCAGCGGCTCGCCGTCCAAGTCTAAATGGACGTCCCTCGGAGGACCATGGGTGGTGATCGCGGCGGGCGCCGTTCAGTGCTTCGTCGGGTTCATGTTCATTTGGGCTTCCGTCGTTGGTTTGATCGACCCGCCGCCGGTGCCGGTTATGTGCTTTTTCGCGTGGCTTGGTTCTAACGGTCAAACCTTCTTGAACACCACCAACGTTGTTACTGGCTTACGCAATTTCCCTGATTATAGCGGCACCATCATCGGCATCATGAAGGGATTTGTTGGACTCAGTGGAGCAATCCTGATTCAACTGTATCATACATTTTGTGATGGTGACCCAACCACTTACCTTTTGATGCTTGCTTGCTTGCCTGCATTTATCTGCATATTGCTTATGTTTTTGTCGAGGATCTATGAAGTGGACGATGGTGATTACAAGAAGCATTTGAATAGTTTCTCTGTGGTTACTGTGATTATTGTTGCCTATCTCATGTTCATAATACTTTTGCAAAATTTCGTTAGCTTACCATATTGGGGACGGTTGTTCATATTTGTAATCCTTATGGTTCTACTAGCATTGCCTTTTGGTATTGCTATCAAAGCACAGTTGGAGGAGTCACAGAAATTTTCACAAACCTACTCTATTCAGAGGGTCTCTGCTACAAACGATGGCAAGTTAATTACATCCTCCAGTCATGCTCCATCAGGGGATCAAATGGAATACCAAGAGCTTCCAAGTGATGAGGGGCAGGTACAGGTGGCTTCAGCAGATGATGGCATGTTGCCACATGAAGTAGAAATGAACCTCTTGCAAGCTATGTGTACGGTTGATTTTTGGATGTTGTTTGTAACCATGATATCAGGGTTGGGCTCTGGGTTGGCAACAATAAATAATATGAGCCAAATTGGGCAATCTCTTGGCTATAGTACTATTGAGATTAATAACTTGGTGTCACTATGGAGTATGTGGAATTTTCTTGGCCGTTTTGGAGGTGGGCATGTATCTGATTATATCATGCACAAAAAAGGTTGGCCGAGGCCATTGTTGATGACCGCAACTCTGGGGATAATGATTATTGGCCATGTAATTATAGCCACTGGTTTCCGTGGAAATCTGTATTTGGGTCCTGTCCTGGTGGGAATCTGCTATGGTGCTAATTGGTCCTTAATGCCTACGATCACTTCTGAGATATTTGGTGTAAAGCATATGGGTACCATTTTCAACACTATTGCTGCATCGAGTCCACTTGGATCTTATATACTTTCTGTGAGAGTTGTTGGATATATTTATGACAAGGAAGCTAGTGAAGAAGATAACTCATGCATTGGCGTCCACTGTTTCATGTCATCGTTTCTGATCCTGGCAGGTGTGGCTTTTCTTGCATTTTTGTTTGGTCTGGCATTATTCTTCCGGACCCAAAGGTTCTATAAGCAAGTTGTGATTAGAAGATTAAAACATTATGCACGATGA 1698 0.4529 MMMKMEWVANRWTCVAAAIWIQWSCGASYTFSIYSPVLKSTQGYDQSTLDTVSVFKDIGANFGILSGLLYSAVAPYTDSRSGSPSKSKWTSLGGPWVVIAAGAVQCFVGFMFIWASVVGLIDPPPVPVMCFFAWLGSNGQTFLNTTNVVTGLRNFPDYSGTIIGIMKGFVGLSGAILIQLYHTFCDGDPTTYLLMLACLPAFICILLMFLSRIYEVDDGDYKKHLNSFSVVTVIIVAYLMFIILLQNFVSLPYWGRLFIFVILMVLLALPFGIAIKAQLEESQKFSQTYSIQRVSATNDGKLITSSSHAPSGDQMEYQELPSDEGQVQVASADDGMLPHEVEMNLLQAMCTVDFWMLFVTMISGLGSGLATINNMSQIGQSLGYSTIEINNLVSLWSMWNFLGRFGGGHVSDYIMHKKGWPRPLLMTATLGIMIIGHVIIATGFRGNLYLGPVLVGICYGANWSLMPTITSEIFGVKHMGTIFNTIAASSPLGSYILSVRVVGYIYDKEASEEDNSCIGVHCFMSSFLILAGVAFLAFLFGLALFFRTQRFYKQVVIRRLKHYAR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00028 565 ProSiteProfiles Major facilitator superfamily (MFS) profile. 352 565 IPR020846 GO:0022857
Gabi3329g00028 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 553 - -
Gabi3329g00028 565 Pfam Nodulin-like 11 73 IPR010658 -
Gabi3329g00028 565 Pfam Nodulin-like 95 274 IPR010658 -
Gabi3329g00028 565 CDD MFS_Mch1p_like 11 537 - -
Gabi3329g00028 565 Gene3D MFS general substrate transporter like domains 353 562 IPR036259 -
Gabi3329g00028 565 Pfam Major Facilitator Superfamily 357 550 IPR011701 GO:0022857|GO:0055085
Gabi3329g00028 565 SUPERFAMILY MFS general substrate transporter 234 550 IPR036259 -
Gabi3329g00028 565 SUPERFAMILY MFS general substrate transporter 8 212 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3329g00028 Gabi-Chr3329 308549 312871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3329g00028 5 562 Nodulin-like Gene Family AT1G74780 56.708 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3329g00028 - - gmx:100799596 945.266