Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00026 ATGACCCATAAGGGTGGAATAAACCTTGCATGTGCTTCATGCAAATACCAGAGAAGAAAGTGCACTCCTGAGTGCCCTCTTGCTCCATACTTCCCTGCAGACCAACCAAGGGTGTTTCTTAATGTCCATAAGCTATTTGGAGTAAGCAACATTAATAAGATGTTGAAGAAGTTGGAGCCTAGTCAAAAAAGAATAGCTATGGAGACTCTCATTACTCAAGCAAATTATAGAGAAATGTATCCAGTTCATGGTTGTTGGGAAGAAGTTTGTAGGCTACGTTACCAAATATGGCAAATGGAAGAAGAGCTTCATGTTTTTCATCAACAACTTGAGATGTATAGGCAACATCACCAACATCAAGGACAATCCATGCATGATGATCATGTCACTTCACAATTAGAGTTGGGAATGGCACCAAGTACTAATGCTCTTCCTCTCTTCAATGCTCCACAGTCACAGATTTATAACAACACAATGGCTACTTTGCCTGTGTCACAGCAACATTCTTACTCCAACAACAGCATGGCCTATAACTCCCTTTACATGGATTCAAAGGATTATCTCACAAACCAATTGTGGGTTCAGCATCCCTACACAAATCACAATAATAGCAATTCCATGACAGTGCAATCTCAATTGGTTACCACACAGCCACTGCCTGTTCAACAGGAAGTTGTTGAAGATTATGATGAGATACATCCATTTTTTGATCATACAATTGATGACAGACAATCATATATTTATTCCGAGGAGGCTTATGAGCCAAGTTCCGAAGAATCACTGAGGGATACAAGAAAGTGCATTGAGACTGTTGCTGAGAATGAATTGAAGAGTGCTGCTGCATGCTTCAGCCTTACTAGTGTCAGCTAG 870 0.4046 MTHKGGINLACASCKYQRRKCTPECPLAPYFPADQPRVFLNVHKLFGVSNINKMLKKLEPSQKRIAMETLITQANYREMYPVHGCWEEVCRLRYQIWQMEEELHVFHQQLEMYRQHHQHQGQSMHDDHVTSQLELGMAPSTNALPLFNAPQSQIYNNTMATLPVSQQHSYSNNSMAYNSLYMDSKDYLTNQLWVQHPYTNHNNSNSMTVQSQLVTTQPLPVQQEVVEDYDEIHPFFDHTIDDRQSYIYSEEAYEPSSEESLRDTRKCIETVAENELKSAAACFSLTSVS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00026 289 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 153 - -
Gabi3329g00026 289 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Gabi3329g00026 289 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3329g00026 Gabi-Chr3329 296032 297262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3329g00026 1 252 AS2 family AT3G47870 38.235 2.87e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi3329g00026 LOB 4.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3329g00026 - - zju:125422406 375.555