Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3329g00016 ATGGGCATGGATTACTACAACATATTGAAAGTGAATCGAAACGCGAGCGATGAAGATTTGAAGAAGGCTTACAAGAGGCTCGCTATGATATGGCACCCTGACAAGAACCCCGTTAACAAGAGCGAAGCCGAAGCCAAATTCAAACGAATCTCCGAAGCCTACGACGTTTTGAGCGATCCGCAGAAGCGTCAGATCTACGATCTCTACGGCGAGGAGGCACTGAAGTCCGGTCAGTTCCCGCCACCTCCGCAATCTTCTTCTTCTTCGTCGTCTTCGTCTTCACGCGTTTACCAGAACCACCACCACCGCCAGAACCCTACCACCTCGTTCCGCTTCAACCCCCGCGACGCCGACGACATTTACGCCGAGTTCTTCGGTCCCGACGGCGCCGACGCCGGCGGCGGTCCCCGCAGGGACGCGAAATGTCGGAATGTGGAGGAGATTTTGACTATTGAGATTAAACCTGGCTGGAAGAAAGGAACAAAGATTACCTTCCCAGAAAAGGGTAACCAGCAGCCTGGCGTGATCCCAGCAGATCTTATTTTTGTGATAGATGAGAAACCACATGCTCTTTATAGAAGGGATGGTAGTGATTTGGTGATCAACCAGGAGATAACTCTTCTGGATGCGCTTACAGGTAAAACCTTGGACCTCACCACCTTGGATGGAAGGAGTCTCGTGATCCCATTGACAGATATAGTCAAACCTGGTGCTGAGGTTGTTGTCCCTAATGAAGGAATGCCCATATCAAAAGAGCCTGGGAGGAAGGGGAATTTGAGAATCAAGCTTGATGTTAAGTATCCTTCAAGGTTAACTCCAGAACAGAAATCTGATCTGAGGAGAGTTTTAGGTGGAAGCTCATAA 864 0.4965 MGMDYYNILKVNRNASDEDLKKAYKRLAMIWHPDKNPVNKSEAEAKFKRISEAYDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSSSSSSSRVYQNHHHRQNPTTSFRFNPRDADDIYAEFFGPDGADAGGGPRRDAKCRNVEEILTIEIKPGWKKGTKITFPEKGNQQPGVIPADLIFVIDEKPHALYRRDGSDLVINQEITLLDALTGKTLDLTTLDGRSLVIPLTDIVKPGAEVVVPNEGMPISKEPGRKGNLRIKLDVKYPSRLTPEQKSDLRRVLGGSS 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3329g00016 287 Gene3D DnaJ domain 2 131 IPR036869 -
Gabi3329g00016 287 FunFam DNAJ heat shock family protein 188 283 - -
Gabi3329g00016 287 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Gabi3329g00016 287 Gene3D - 189 269 - -
Gabi3329g00016 287 MobiDBLite consensus disorder prediction 74 113 - -
Gabi3329g00016 287 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Gabi3329g00016 287 CDD DnaJ 4 59 IPR001623 -
Gabi3329g00016 287 Pfam DnaJ domain 4 67 IPR001623 -
Gabi3329g00016 287 Gene3D - 132 188 - -
Gabi3329g00016 287 PRINTS DnaJ domain signature 62 81 IPR001623 -
Gabi3329g00016 287 PRINTS DnaJ domain signature 24 39 IPR001623 -
Gabi3329g00016 287 PRINTS DnaJ domain signature 42 62 IPR001623 -
Gabi3329g00016 287 PRINTS DnaJ domain signature 6 24 IPR001623 -
Gabi3329g00016 287 CDD DnaJ_C 137 271 - -
Gabi3329g00016 287 SUPERFAMILY Chaperone J-domain 3 84 IPR036869 -
Gabi3329g00016 287 Pfam DnaJ C terminal domain 117 268 IPR002939 -
Gabi3329g00016 287 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 140 283 - -
Gabi3329g00016 287 SMART dnaj_3 3 62 IPR001623 -
Gabi3329g00016 287 FunFam Dnaj homolog subfamily b member 136 187 - -
Gabi3329g00016 287 SUPERFAMILY HSP40/DnaJ peptide-binding domain 192 277 IPR008971 GO:0006457|GO:0051082
Gabi3329g00016 287 FunFam DnaJ subfamily B member 13 3 134 - -
Gabi3329g00016 287 MobiDBLite consensus disorder prediction 79 112 - -
Gabi3329g00016 287 SUPERFAMILY HSP40/DnaJ peptide-binding domain 141 189 IPR008971 GO:0006457|GO:0051082
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3329g00016 Gabi-Chr3329 210173 215338 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3329g00016 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 4.92e-09 55.1