Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00037 ATGGAAGGAGGAGGAGCTGCTCCGCCAGCTGATACCGTCATGTCGGATGCGGTGGCGCCTCCGCCGCAGCAACCCGACCCTCAACAGCAGCAGCAGCCGGCGGCGATGGGGATGGAGAATATTCCGGCGACACTTAGCCACGGTGGCAGGTTCATTCAATACAACATATTCGGTAACATATTTGAAGTAACCTCAAAATACAGACCCCCCATCATGCCAATCGGCAAAGGCGCTTACGGCATCGTCTGTTCGGCTCTGAACTCAGAAACGAATGAGCATGTTGCCATCAAGAAGATTGCTAATGCTTTTGACAACAGAATTGATGCCAAGAGGACCCTCCGTGAAATCAAGCTGCTTCGCCATATGGATCATGAAAACGTGGTTGCAATAAGGGATATAGTGCCACCACCTCAAAGGGAGGCATTCAATGATGTTTACATTGCATATGAGCTAATGGACACTGACCTTTATCAAATCATTCGTTCAAATCAAGGGTTATCAGAGGAGCACTGTCAGTATTTTCTGTATCAGATCCTTCGTGGGTTGAAGTACATACATTCTGCAAATGTTCTGCATCGGGACTTAAAGCCTAGCAACCTTCTCCTGAATGCCAACTGTGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCGGAGACTGATTTTATGACTGAATATGTCGTTACAAGATGGTACCGAGCACCAGAGCTTCTGTTAAACTCTTCTGATTACACCGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAACTGATGGATCGAAAGCCTTTATTTCCTGGCAGAGATCATGTTCATCAGTTGCGTCTACTTATGGAGCTGATTGGCACCCCATCGGAAACTGATTTGGGGTTTCTAAATGAAAATGCCAAGAGATACATTAGGCAACTACCTCTTTACCGCCGCCAATCTTTCCAAGAAAAGTTTCCAAGTGTTCATCCTGAAGCTATAGATCTTGTTGAAAGAATGTTAACTTTTGATCCTAGAGAAAGGATTACTGTTGAAGGTGCACTGGCACACCCCTACTTAACATCTCTGCATGACATCAGTGATGAACCTGTGTGCACGACTCCCTTCAACTTTGACTTTGAACAACATGCTTTAACAGAGGAACAGATGAAAGAACTGATATACCGAGAGGCTCTAGCATTTAACCCTGAGTATCAGCAGTAG 1203 0.4514 MEGGGAAPPADTVMSDAVAPPPQQPDPQQQQQPAAMGMENIPATLSHGGRFIQYNIFGNIFEVTSKYRPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNRIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREAFNDVYIAYELMDTDLYQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSETDLGFLNENAKRYIRQLPLYRRQSFQEKFPSVHPEAIDLVERMLTFDPRERITVEGALAHPYLTSLHDISDEPVCTTPFNFDFEQHALTEEQMKELIYREALAFNPEYQQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00037 400 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 66 354 - -
Gabi3325g00037 400 Pfam Protein kinase domain 73 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3325g00037 400 FunFam Mitogen-activated protein kinase 53 161 - -
Gabi3325g00037 400 SMART serkin_6 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3325g00037 400 Gene3D Transferase(Phosphotransferase) domain 1 152 380 - -
Gabi3325g00037 400 CDD STKc_TEY_MAPK 61 396 - -
Gabi3325g00037 400 Gene3D Phosphorylase Kinase; domain 1 51 390 - -
Gabi3325g00037 400 ProSiteProfiles Protein kinase domain profile. 68 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3325g00037 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Gabi3325g00037 400 FunFam Mitogen-activated protein kinase 152 380 - -
Gabi3325g00037 400 SUPERFAMILY Protein kinase-like (PK-like) 73 361 IPR011009 -
Gabi3325g00037 400 ProSitePatterns Protein kinases ATP-binding region signature. 74 98 IPR017441 GO:0005524
Gabi3325g00037 400 ProSitePatterns MAP kinase signature. 103 206 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi3325g00037 400 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00037 Gabi-Chr3325 379198 383463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00037 1 400 MAP Kinase Gene Family AT2G43790 84.975 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi3325g00037 Pkinase 1.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00037 K14512 - gmx:547616 754.592