Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00026 ATGGGAAAGAAGGGAAGTTGGTTTTCTGCAATCAAGAGGATTTTCACACACCACTCCAAGGGGAAGGATTCGGATAATCAAAGCACAAAAGAGAAGAAGAAAGGTCTAGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAAAAAATCTTTGGGGACTTTGAAAGAGAGCAACAAATATTAACAATAAGGCCTCCCACGCCTTCTGACCAACCCAAAACCCCACCTGTTGTCCCTCCTAGAGCTGTTTCTCCAAGGGCTCCATCTCCGAGGAATGCTTCTCCTAGGGCTCTTTCTCCGCGAGTTGCCTCTCCCAAAGCTGCTTCTTCCCGGATTGTTCATCACCACAAGGAGGTTGGCCACAGACCAGAACCAACTTTAAGGAACCAGCATGCCTCAGCTACTAAGATCCAGGCTACTTATAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCTTTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACTGTTAATGCCATGAAACACATGCAGCTTTTGGTGCGAGTTCAATCTCAGATTCAATCTCGAAGAATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGACAAGGATGTGGCAAGTACCTTGGGGAAATTGACTTTAGGCCATGCTTCTGAGGCAGGTAACAATGATGAGTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATGATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGCCACTCCAAAATCAACTCAAACACCGGTGACAGATATGCGATCCGGTGGATTTCCATGGTGGTGGAACTGGTTGGAAAGACAACTGCCTGCAGCAGCAAATCCACAAGAAAGACAAGTCTTGAACAATTTTCAACTCACACCTTCAAGACCATATTCAGAGCAGAAAACTAGTCCAAGACCTGCCTCAAGCACTCATATGAGGCATCATTTTGCCTTTGACAATATGGATACACCAACTCCAAAATCCACTAAATCAACTATTCTGACATCTTCAAAACCAGCCAGAACTCCTCCATATAGAACTCCACAAGCAAACAGCTCAAGCTTTTCAAAACATACAAGGCCAAGGGCTGTGGGGGCTAATTCACCTTTTGATGTGCCACTGAAGGATGATGATAGTCTCACAAGCTGTCCACCATTTTCTGTGCCAAACTACATGACTCCAACAGTTTCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATCCAAGAGAAAGGTTTGGTGGGACTCCAACCAGTGATTCAAAGAGGAGACTTTCATTTCCTTTGTCCCAAGGAATTGGACCCTTTAAATGGAATAAAGGGTCCTTGTTCTCAAGCAAGGATCCTAGCTCTCAGAGGATGCCAGATAAATATCAGTCACTTGAATCTTTAGGAAATGTGAGTGTGGATTCAACGGTATCTTTGCCCGCAAGAGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1575 0.4476 MGKKGSWFSAIKRIFTHHSKGKDSDNQSTKEKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQILTIRPPTPSDQPKTPPVVPPRAVSPRAPSPRNASPRALSPRVASPKAASSRIVHHHKEVGHRPEPTLRNQHASATKIQATYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDVASTLGKLTLGHASEAGNNDEWDDSLLTKEEIEARLQRKVEAMIKRERAMAFAYSHQLWKATPKSTQTPVTDMRSGGFPWWWNWLERQLPAAANPQERQVLNNFQLTPSRPYSEQKTSPRPASSTHMRHHFAFDNMDTPTPKSTKSTILTSSKPARTPPYRTPQANSSSFSKHTRPRAVGANSPFDVPLKDDDSLTSCPPFSVPNYMTPTVSAKAKVRASSNPRERFGGTPTSDSKRRLSFPLSQGIGPFKWNKGSLFSSKDPSSQRMPDKYQSLESLGNVSVDSTVSLPARVGRKPFTRFV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 1 47 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 121 135 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 326 346 - -
Gabi3325g00026 524 Pfam Protein of unknown function (DUF4005) 385 468 IPR025064 -
Gabi3325g00026 524 Pfam IQ calmodulin-binding motif 141 161 IPR000048 GO:0005515
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 326 412 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 438 462 - -
Gabi3325g00026 524 PANTHER IQ-DOMAIN 5-RELATED 1 466 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 72 143 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 447 462 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 78 96 - -
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 16 40 - -
Gabi3325g00026 524 Gene3D - 121 160 - -
Gabi3325g00026 524 ProSiteProfiles IQ motif profile. 140 168 IPR000048 GO:0005515
Gabi3325g00026 524 SMART iq_5 139 161 IPR000048 GO:0005515
Gabi3325g00026 524 MobiDBLite consensus disorder prediction 359 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00026 Gabi-Chr3325 249074 254855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00026 1 523 IQD Protein Family AT3G59690 52.827 1.48e-167 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00026 - - lang:109331805 807.364