Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00025 ATGGGAAAGAAGGGAAGTTGGTTTTCTGCAATCAAGAGGATTTTCACACACCACTCCAAGGGGAAGCAGGATTCGGATAATCAAAGCACAAAAGAGAAGAAGAAAGGTCTAGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAGCCAAGCAGCATTGAAAAAATCTTTGGGGACTTTGAAAGAGAGCAACAAATATTAACAATAAGGCCTCCCACGCCTTCTGACCAACCCAAAACCCCACCTGTTGTCCCTCCTAGAGCTGTTTCTCCAAGGGCTCCATCTCCGAGGAATGCTTCTCCTAGGGCTCTTTCTCCGCGAGTTGCCTCTCCCAAAGCTGCTTCTTCCCGGATTGTTCATCACCACAAGGAGGTTGGCCACAGACCAGAACCAACTTTAAGGAACCAGCATGCCTCAGCTACTAAGATCCAGGCTACTTATAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCTTTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACTGTTAATGCCATGAAACACATGCAGCTTTTGGTGCGAGTTCAATCTCAGATTCAATCTCGAAGAATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGACAAGGATGTGGCAAGTACCTTGGGGAAATTGACTTTAGGCCATGCTTCTGAGGCAGGTAACAATGATGAGTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATGATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGCCACTCCAAAATCAACTCAAACACCGGTGACAGATATGCGATCCGGTGGATTTCCATGGTGGTGGAACTGGTTGGAAAGACAACTGCCTGCAGCAGCAAATCCACAAGAAAGACAAGTCTTGAACAATTTTCAACTCACACCTTCAAGACCATATTCAGAGCAGAAAACTAGTCCAAGACCTGCCTCAAGCACTCATATGAGGCATCATTTTGCCTTTGACAATATGGATACACCAACTCCAAAATCCACTAAATCAACTATTCTGACATCTTCAAAACCAGCCAGAACTCCTCCATATAGAACTCCACAAGCAAACAGCTCAAGCTTTTCAAAACATACAAGGCCAAGGGCTGTGGGGGCTAATTCACCTTTTGATGTGCCACTGAAGGATGATGATAGTCTCACAAGCTGTCCACCATTTTCTGTGCCAAACTACATGACTCCAACAGTTTCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATCCAAGAGAAAGGTTTGGTGGGACTCCAACCAGTGATTCAAAGAGGAGACTTTCATTTCCTTTGTCCCAAGGAATTGGACCCTTTAAATGGAATAAAGGGTCCTTGTTCTCAAGCAAGGATCCTAGCTCTCAGAGGATGCCAGATAAATATCAGTCACTTGAATCTTTAGGAAATGTGAGTGTGGATTCAACGGTATCTTTGCCCGCAAGAGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1578 0.448 MGKKGSWFSAIKRIFTHHSKGKQDSDNQSTKEKKKGLGKLRHGETNSFIPLFREPSSIEKIFGDFEREQQILTIRPPTPSDQPKTPPVVPPRAVSPRAPSPRNASPRALSPRVASPKAASSRIVHHHKEVGHRPEPTLRNQHASATKIQATYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDVASTLGKLTLGHASEAGNNDEWDDSLLTKEEIEARLQRKVEAMIKRERAMAFAYSHQLWKATPKSTQTPVTDMRSGGFPWWWNWLERQLPAAANPQERQVLNNFQLTPSRPYSEQKTSPRPASSTHMRHHFAFDNMDTPTPKSTKSTILTSSKPARTPPYRTPQANSSSFSKHTRPRAVGANSPFDVPLKDDDSLTSCPPFSVPNYMTPTVSAKAKVRASSNPRERFGGTPTSDSKRRLSFPLSQGIGPFKWNKGSLFSSKDPSSQRMPDKYQSLESLGNVSVDSTVSLPARVGRKPFTRFV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 122 136 - -
Gabi3325g00025 525 SMART iq_5 140 162 IPR000048 GO:0005515
Gabi3325g00025 525 ProSiteProfiles IQ motif profile. 141 169 IPR000048 GO:0005515
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 360 399 - -
Gabi3325g00025 525 Pfam Protein of unknown function (DUF4005) 386 469 IPR025064 -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 1 51 - -
Gabi3325g00025 525 Pfam IQ calmodulin-binding motif 142 162 IPR000048 GO:0005515
Gabi3325g00025 525 Gene3D - 122 161 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 327 347 - -
Gabi3325g00025 525 PANTHER IQ-DOMAIN 5-RELATED 1 467 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 327 413 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 439 463 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 73 144 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 448 463 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 79 97 - -
Gabi3325g00025 525 MobiDBLite consensus disorder prediction 17 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00025 Gabi-Chr3325 249073 254855 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00025 1 524 IQD Protein Family AT3G59690 53.357 1.54e-169 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00025 - - lang:109331805 809.675