Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00020 ATGAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCCATGCTCTGTTGATCAAAGCAATTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCCATCACTACTAAGGAGAGAAAGGAAAAGCTTGGCGAACGAATTGTTGCGCTTCAGCAGCTTGTTTCACCATATGGGAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAACTTCACCAACGAACAAGATGCAGGGTACAGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACTATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACTACTTCACCTAAACTTGAGAATGATGTGTCGCAATTTCATTGA 462 0.4242 MREEGIDVRKMMGHKRSPCSVDQSNYTSIASKRQKADLSITTKERKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETSPTNKMQGTEPCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTSPKLENDVSQFH 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00020 153 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 28 123 - -
Gabi3325g00020 153 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 33 82 IPR011598 GO:0046983
Gabi3325g00020 153 CDD bHLH_AtbHLH_like 39 90 IPR045239 -
Gabi3325g00020 153 FunFam Transcription factor bHLH113 family 32 107 - -
Gabi3325g00020 153 MobiDBLite consensus disorder prediction 1 16 - -
Gabi3325g00020 153 MobiDBLite consensus disorder prediction 1 25 - -
Gabi3325g00020 153 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 37 98 IPR036638 GO:0046983
Gabi3325g00020 153 Gene3D - 30 102 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00020 Gabi-Chr3325 191404 194733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00020 11 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.947 8.94e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00020 - - gmx:100809747 276.559