Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00018 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCAAGAGAAGAGGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCCATGCTCTGTTGATCAAAGCAATTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCCATCACTACTAAGGAGAGAAAGGAAAAGCTTGGCGAACGAATTGTTGCGCTTCAGCAGCTTGTTTCACCATATGGGAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAACTTCACCAACGAACAAGATGCAGGGTACAGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACTATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACTACTTCACCTAAACTTGAGAATGATGTGTCGCAATTTCATTGA 501 0.4232 MIASSFCNADSMFSREEGIDVRKMMGHKRSPCSVDQSNYTSIASKRQKADLSITTKERKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETSPTNKMQGTEPCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTSPKLENDVSQFH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00018 166 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 136 - -
Gabi3325g00018 166 Gene3D - 43 115 IPR036638 GO:0046983
Gabi3325g00018 166 FunFam Transcription factor bHLH113 family 45 120 - -
Gabi3325g00018 166 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Gabi3325g00018 166 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Gabi3325g00018 166 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 111 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00018 Gabi-Chr3325 189194 194733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00018 24 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.947 8.86e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00018 - - gmx:100809747 303.908