Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00015 ATGATAGCCAGCTCCTTCTGCAATGCTGATTCTATGTTTTCAGTAAAGGGGATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCCATGCTCTGTTGATCAAAGCAATTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCCATCACTACTAAGGAGAGAAAGGAAAAGCTTGGCGAACGAATTGTTGCGCTTCAGCAGCTTGTTTCACCATATGGGAAGACAGATACATCTTCTGTTCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAACTTCACCAACGAACAAGATGCAGGGTACAGAGCCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTTACTATTGGAGTTGCTGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACTACTTCACCTAAACTTGAGAATGATGTGTCGCAATTTCATTGA 498 0.4217 MIASSFCNADSMFSVKGIDVRKMMGHKRSPCSVDQSNYTSIASKRQKADLSITTKERKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETSPTNKMQGTEPCSLRSRGLCLVPVSFTIGVAESNGADIWAPIKTTSPKLENDVSQFH 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00015 165 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Gabi3325g00015 165 Gene3D - 42 114 IPR036638 GO:0046983
Gabi3325g00015 165 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 135 - -
Gabi3325g00015 165 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Gabi3325g00015 165 FunFam Transcription factor bHLH113 family 44 119 - -
Gabi3325g00015 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 110 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3325g00015 Gabi-Chr3325 189187 194733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00015 23 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.947 8.18e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00015 - - gmx:100809747 293.123