Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3325g00012 ATGGCATCAGATGACCACTCACTGTCTCTGGAGATATTAGTTCGTGAACCTGAAGAATTTTCACTGTGGACTGGACCCCCTTTCGCCAATGGCCAACCTGGTGTTAAGCTCGAAAAAGTTAATTGTGTGAATGCAAAATTCAGTGATGATGGGTCTAAACTCATGGTCATGAAATCCAATTCTGTGATTAGTGTTTATGACTGCAAAAATGCTAAAGAGATTAGGTCTTTTGAAGTGCCCAATGTTGGAGCTGCTATCTTGTCCCCATGTGGTACTTATTTGCAAACATTTCAAAAACTTTCTGTGCCACAAGAAAAGAACGTCACACTGTGGAAAACGGAGACTGGTGATCATGTTTATCAACACTCCCAAAAGAACATCACAAAGACCAATTGGCCTGCGATTCAATTCAGCTCCGATGAAGCTACCGCATGCCGGTTGGCAACGAATGAGGTACAATTTTTTGATGCTGGGGATTTCTCTAAAGGAGTTATCCATCGGTTAAGAGTTCCACGAGTTGCTGCTATTGAGCTTTCAAGTGCACCTGGGTCTCATATAGCTGCCTTTTTTCCAGAATCCAAGGGCGGTCCTGCTAGTGTACAAATATTTGCTTGTGGAAATGCTTCTCAAAGTCAACCCATTGCTCGACGGAGTTTTTTCCGATGTTCAACCACCCAACTTAAATGGAATCGTGGTTCTACTGGGCTTCTAGTGGTGGTGCAGTCAGATGTTGACAAAACTAATCAGAGTTACTATGGAGAATCAAAGTTGTGCTACCTTACAACAGATGGGATGCATGAAGGACTTGTGCCTCTTCAGAAAGACGGGCCTATTCATGATGCTCAGTGGTCATGTTCTGGCTTGGAATTTGCTGTTGTATATGGGTTTATGCCTGCTAAAGCAACTTTGTTTGACAAGAAGTGCAATCCTTTGCTGGAGCTTGGAACTGGTCCTTACAACACTATTCGATGGAATCCCAAAGGCAAATTTTTATGTTTGGCTGGCTTCGGTAACTTGCCTGGTGATATGGTATTCTGGGATTACATAGATAGGAAACAGCTTAAAGCAACTAAAGCTGAATGGTCCGTGACTAGTGAATGGTCTCCGGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTACGATGGGTCATTGTACTTCAACAAGATGTTTGAGAAGTTGTACCAGGCTGATTGGAAACCAGAGTCACCAAGTAAGTTTGGTGACATCAATGAATTAATCAAGTCTCTAGACTTGGGAAAAGTTGAAGATAAAAAACCAGCAGGTCAAGGACCAAAATCAACCCAGGCTTCTATAAAAGCCTCTTCTGCCAACCCCCCTGTACAAAAACCTGCTGCTTATCGCCCACCACACGCTAAGAATGCAGCTGCTATTCAGGCAGAGTTGCTTGGAGAGAGCTCTGCAGAATCAATGAGCAAGAATGCGTTACGAAACAAGAAAAAGAGGGAGAAACAGAGGGAGAAAAAGGCTGCTTCTGATGCCAGTTCTTCGTGA 1554 0.4344 MASDDHSLSLEILVREPEEFSLWTGPPFANGQPGVKLEKVNCVNAKFSDDGSKLMVMKSNSVISVYDCKNAKEIRSFEVPNVGAAILSPCGTYLQTFQKLSVPQEKNVTLWKTETGDHVYQHSQKNITKTNWPAIQFSSDEATACRLATNEVQFFDAGDFSKGVIHRLRVPRVAAIELSSAPGSHIAAFFPESKGGPASVQIFACGNASQSQPIARRSFFRCSTTQLKWNRGSTGLLVVVQSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLQKDGPIHDAQWSCSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDRKQLKATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYDGSLYFNKMFEKLYQADWKPESPSKFGDINELIKSLDLGKVEDKKPAGQGPKSTQASIKASSANPPVQKPAAYRPPHAKNAAAIQAELLGESSAESMSKNALRNKKKREKQREKKAASDASSS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3325g00012 517 Gene3D - 31 394 IPR015943 GO:0005515
Gabi3325g00012 517 FunFam Eukaryotic translation initiation factor 2A 199 422 - -
Gabi3325g00012 517 SUPERFAMILY DPP6 N-terminal domain-like 42 397 - -
Gabi3325g00012 517 Coils Coil 493 513 - -
Gabi3325g00012 517 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
Gabi3325g00012 517 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 512 IPR011387 GO:0003743|GO:0006413
Gabi3325g00012 517 PIRSF Transl_init_eIF2A 5 517 IPR011387 GO:0003743|GO:0006413
Gabi3325g00012 517 MobiDBLite consensus disorder prediction 434 517 - -
Gabi3325g00012 517 FunFam Eukaryotic translation initiation factor 2A 30 185 - -
Gabi3325g00012 517 MobiDBLite consensus disorder prediction 444 458 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3325g00012 127 418 Eukaryotic Initiation Factors Gene Family AT5G27640 24.756 2.34e-19 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3325g00012 K15026 - gmx:100811589 915.22